RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CNOT6Q9ULM6 557 aaKnown RBP11.5□□□□□ -0.57
VTA1-203ENST00000452973 PCDHA9Q9Y5H5 950 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 ST14Q9Y5Y6 855 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 ARPC2O15144 300 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 SGTAO43765 313 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 C8BP07358 591 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 CKMT2P17540 419 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 MAP4P27816 1152 aaKnown RBP11.5□□□□□ -0.57
VTA1-203ENST00000452973 PDHA2P29803 388 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 TMEM115Q12893 351 aaPredicted RBP11.5□□□□□ -0.57
VTA1-203ENST00000452973 GK3PQ14409 553 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 CYP51A1Q16850 503 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 RNF220Q5VTB9 566 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 NPAS3Q8IXF0 933 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 BTN2A2Q8WVV5 523 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 GLYATL1Q969I3 302 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 MIEF2Q96C03 454 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 ZSCAN5AQ9BUG6 496 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 NTMT1Q9BV86 223 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 DPY30Q9C005 99 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 COQ10BQ9H8M1 238 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 HEBP1Q9NRV9 189 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 ABCD2Q9UBJ2 740 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 PCDHGB4Q9UN71 923 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 CCL27Q9Y4X3 112 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 PCDHGB5Q9Y5G0 923 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 PLXNB3Q9ULL4 1909 aa11.5□□□□□ -0.57
VTA1-203ENST00000452973 ATG2BQ96BY7 2078 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 HEPACAM2A8MVW5 462 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 WNT9AO14904 365 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 NUAK1O60285 661 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 MMP20O60882 483 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 LRATO95237 230 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 KRT6AP02538 564 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 KRT6BP04259 564 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 C8GP07360 202 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 NFKBIAP25963 317 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 OXTRP30559 389 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 MMP12P39900 470 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 WASP42768 502 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 KRT6CP48668 564 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 SELPLGQ14242 412 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 PDK3Q15120 406 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 MMAAQ8IVH4 418 aaKnown RBP11.49□□□□□ -0.57
VTA1-203ENST00000452973 TRAM1L1Q8N609 369 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 CDC26Q8NHZ8 85 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 PIP4K2CQ8TBX8 421 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 TSSK3Q96PN8 268 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 SEPHS2Q99611 448 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 EFHD1Q9BUP0 239 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 ACPTQ9BZG2 426 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 DPP7Q9UHL4 492 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 CROCCQ5TZA2 2017 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 CXorf51AA0A1B0GTR3 108 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 TCRBV3S1A0A5B6 114 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 DHRS12A0PJE2 317 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 SAC3D1A6NKF1 404 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 C5orf67F2Z3F1 127 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 PEX1O43933 1283 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 FTH1P02794 183 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 SLC7A1P30825 629 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 BDKRB1P46663 353 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 GRIK2Q13002 908 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 SPANXN4Q5MJ08 99 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 CACHD1Q5VU97 1274 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 SUSD1Q6UWL2 747 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 ZBTB18Q99592 522 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 AP4B1Q9Y6B7 739 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 SLC28A1O00337 649 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
VTA1-203ENST00000452973 VARSP26640 1264 aaKnown RBP11.49□□□□□ -0.57
VTA1-203ENST00000452973 CDKL1Q00532 357 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 CHIT1Q13231 466 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 GRM2Q14416 872 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 PLEKHS1Q5SXH7 462 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 RAET1GQ6H3X3 334 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 DPPA4Q7L190 304 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 RTL10Q7L3V2 364 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 ANKRD46Q86W74 232 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 TRAPPC5Q8IUR0 188 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 PLPP6Q8IY26 295 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 PHC3Q8NDX5 983 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 NR1H4Q96RI1 486 aaPredicted RBP11.49□□□□□ -0.57
VTA1-203ENST00000452973 THUMPD3Q9BV44 507 aaKnown RBP11.49□□□□□ -0.57
VTA1-203ENST00000452973 FBXO10Q9UK96 956 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 PRKAB1Q9Y478 270 aa11.49□□□□□ -0.57
VTA1-203ENST00000452973 A6NHS1 94 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 LIN7AO14910 233 aaPredicted RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 RECQL5O94762 991 aaPredicted RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 RB1P06400 928 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 SRPRAP08240 638 aaKnown RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 NAE1Q13564 534 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 SF1Q15637 639 aaKnown RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 TECPR1Q7Z6L1 1165 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 DDHD1Q8NEL9 900 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ADCY4Q8NFM4 1077 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ARRDC3Q96B67 414 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ASB16Q96NS5 453 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 MTERF1Q99551 399 aaKnown RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 OR2AG1Q9H205 316 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms