RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SLC41A2Q96JW4 573 aa17.02■□□□□ 0.32
FAM3A-216ENST00000449971 CD180Q99467 661 aa17.02■□□□□ 0.32
FAM3A-216ENST00000449971 TWSG1Q9GZX9 223 aa17.02■□□□□ 0.32
FAM3A-216ENST00000449971 TREX1Q9NSU2 369 aa17.02■□□□□ 0.32
FAM3A-216ENST00000449971 SYBUQ9NX95 663 aa17.02■□□□□ 0.32
FAM3A-216ENST00000449971 SEMA5BQ9P283 1151 aa17.02■□□□□ 0.32
FAM3A-216ENST00000449971 MARCH4Q9P2E8 410 aaPredicted RBP17.02■□□□□ 0.32
FAM3A-216ENST00000449971 ESPL1Q14674 2120 aa17.02■□□□□ 0.31
FAM3A-216ENST00000449971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.01■□□□□ 0.31
FAM3A-216ENST00000449971 PIPSLA2A3N6 862 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 TLCD2A6NGC4 264 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 CSE1LP55060 971 aaKnown RBP17.01■□□□□ 0.31
FAM3A-216ENST00000449971 KCNJ11Q14654 390 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 KCNAB1Q14722 419 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 OTUD6BQ8N6M0 293 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 OR52E1Q8NGJ3 308 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 ACTRT1Q8TDG2 376 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 HGH1Q9BTY7 390 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 KIFC1Q9BW19 673 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 TSSK1BQ9BXA7 367 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 TFB2MQ9H5Q4 396 aaKnown RBP17.01■□□□□ 0.31
FAM3A-216ENST00000449971 XKR8Q9H6D3 395 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 PDE7BQ9NP56 450 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 MAP10Q9P2G4 905 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 LNPEPQ9UIQ6 1025 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 SNX12Q9UMY4 172 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 ASF1AQ9Y294 204 aa17.01■□□□□ 0.31
FAM3A-216ENST00000449971 GOLGA6L10A0A0M3HER8 536 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 SLC5A10A0PJK1 596 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 GSAPA4D1B5 854 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 ZNF185O15231 689 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 AVILO75366 819 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 NDUFS3O75489 264 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 KIAA0754O94854 1291 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 VAPBO95292 243 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 FOLR1P15328 257 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 COL8A1P27658 744 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 TTPAP49638 278 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 KPNA2P52292 529 aaKnown RBP17■□□□□ 0.31
FAM3A-216ENST00000449971 HSD11B2P80365 405 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 PLOD1Q02809 727 aaPredicted RBP17■□□□□ 0.31
FAM3A-216ENST00000449971 CYP1B1Q16678 543 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 ANKRD22Q5VYY1 191 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 ZNF787Q6DD87 383 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 CYB5D1Q6P9G0 228 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 FBXO38Q6PIJ6 1188 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 PPP1R3BQ86XI6 285 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 KMT5CQ86Y97 462 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 OR5AR1Q8NGP9 310 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 MFSD3Q96ES6 412 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 NRTNQ99748 197 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 TEP1Q99973 2627 aaKnown RBP17■□□□□ 0.31
FAM3A-216ENST00000449971 RARRES3Q9UL19 164 aa17■□□□□ 0.31
FAM3A-216ENST00000449971 TNRC6AQ8NDV7 1962 aaKnown RBP17■□□□□ 0.31
FAM3A-216ENST00000449971 IQCF5A8MTL0 148 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 BHMG1C9JSJ3 638 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-216ENST00000449971 BTN3A3O00478 584 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 PHF2O75151 1096 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 SPAG6O75602 509 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 ZBTB11O95625 1053 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-216ENST00000449971 EBLN1P0CF75 366 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 FGF5P12034 268 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 CDH3P22223 829 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 ACADLP28330 430 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 CCR7P32248 378 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 MAGEA6P43360 314 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 ACY1Q03154 408 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 HSPA14Q0VDF9 509 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 TUBB3Q13509 450 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 PTRHD1Q6GMV3 140 aaKnown RBP16.99■□□□□ 0.31
FAM3A-216ENST00000449971 CASC4Q6P4E1 433 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 AMIGO1Q86WK6 493 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 GALNT11Q8NCW6 608 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 CPT1BQ92523 772 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 PPM1MQ96MI6 270 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 CARD6Q9BX69 1037 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 MRM3Q9HC36 420 aaKnown RBP16.99■□□□□ 0.31
FAM3A-216ENST00000449971 SOHLH2Q9NX45 425 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 SOX13Q9UN79 622 aa16.99■□□□□ 0.31
FAM3A-216ENST00000449971 TDRKHQ9Y2W6 561 aaKnown RBP16.99■□□□□ 0.31
FAM3A-216ENST00000449971 ITPR2Q14571 2701 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 SLC9B1P1A6NJY1 282 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 USP27XA6NNY8 438 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 GOLGA8MH3BSY2 632 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 MATN2O00339 956 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 BTN3A1O00481 513 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 PRMT5O14744 637 aaPredicted RBP16.98■□□□□ 0.31
FAM3A-216ENST00000449971 PMS2P54278 862 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 CHAF1BQ13112 559 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.98■□□□□ 0.31
FAM3A-216ENST00000449971 NADK2Q4G0N4 442 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 CRTC2Q53ET0 693 aaPredicted RBP16.98■□□□□ 0.31
FAM3A-216ENST00000449971 TMTC4Q5T4D3 741 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 SDCCAG8Q86SQ7 713 aaPredicted RBP16.98■□□□□ 0.31
FAM3A-216ENST00000449971 CAND1Q86VP6 1230 aaKnown RBP16.98■□□□□ 0.31
FAM3A-216ENST00000449971 TBC1D21Q8IYX1 336 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 KRT222Q8N1A0 295 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 MPP5Q8N3R9 675 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 D2HGDHQ8N465 521 aa16.98■□□□□ 0.31
FAM3A-216ENST00000449971 LKAAEAR1Q8TD35 194 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms