RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 LAPTM5Q13571 262 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 RNF44Q7L0R7 432 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 LINC00471Q8N535 108 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ANKFN1Q8N957 763 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF248Q8NDW4 579 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 SLC6A15Q9H2J7 730 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 C3orf14Q9HBI5 128 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 SEC14L3Q9UDX4 400 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 FAM25EA8MYX2 175 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 MAGEB3O15480 346 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 SLC25A12O75746 678 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 SRPRAP08240 638 aaKnown RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 IL7P13232 177 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 BUD31P41223 144 aaPredicted RBP13.68□□□□□ -0.22
ITGB4-202ENST00000449880 NDUFV1P49821 464 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 LIX1Q8N485 282 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 IPPKQ9H8X2 491 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 C1orf109Q9NX04 203 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
ITGB4-202ENST00000449880 KANTRA0A1W2PQU2 76 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 AURKAO14965 403 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 ITGA10O75578 1167 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 STK16O75716 305 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 MT-ND1P03886 318 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 MON1AQ86VX9 555 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 ZC3H3Q8IXZ2 948 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 ZBTB2Q8N680 514 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 PIGXQ8TBF5 258 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 APOBEC3GQ9HC16 384 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 MIOSQ9NXC5 875 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 AGO1Q9UL18 857 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 GPR25O00155 361 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CHP2O43745 196 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TLL1O43897 1013 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 GLUD1P00367 558 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 DNTTP04053 509 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CD52P31358 61 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 HLCSP50747 726 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CD83Q01151 205 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 DPYSL2Q16555 572 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 BORAQ6PGQ7 559 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF730Q6ZMV8 503 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 OR52B2Q96RD2 323 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 COPS8Q99627 209 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CCDC32Q9BV29 185 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 POLR2J2Q9GZM3 115 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 BRD9Q9H8M2 597 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 MRPL42Q9Y6G3 142 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 MATN3O15232 486 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 NDST3O95803 873 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 FPR1P21462 350 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 S100GP29377 79 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CDH12P55289 794 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 AP1S2P56377 157 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 HACD2Q6Y1H2 254 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TMEM192Q8IY95 271 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 SPPL2BQ8TCT7 592 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TSSK3Q96PN8 268 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TTLL2Q9BWV7 592 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 RPF2Q9H7B2 306 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CALML5Q9NZT1 146 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TIMM22Q9Y584 194 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CLDN5O00501 218 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 PDPK1O15530 556 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TLR5O60602 858 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 PRMT3O60678 531 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 ENTPD6O75354 484 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 GADD45GO95257 159 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CXCL14O95715 111 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 PTTG1O95997 202 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 IFNA6P05013 189 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 IFI30P13284 250 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 L1CAMP32004 1257 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 RPL4P36578 427 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 DNAJB13P59910 316 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TRMT10BQ6PF06 316 aaKnown RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 UBE2R2Q712K3 238 aaPredicted RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 SLC7A6OSQ96CW6 309 aaPredicted RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CLIP3Q96DZ5 547 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 MFSD3Q96ES6 412 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 CCDC115Q96NT0 180 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 SLA2Q9H6Q3 261 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 KIAA1522Q9P206 1035 aaPredicted RBP13.67□□□□□ -0.22
ITGB4-202ENST00000449880 TBC1D24Q9ULP9 559 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 PCDHGB1Q9Y5G3 927 aa13.67□□□□□ -0.22
ITGB4-202ENST00000449880 PER2O15055 1255 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 NMBRP28336 390 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 GMLQ99445 158 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 TLE6Q9H808 572 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 FZD10Q9ULW2 581 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 PPIEQ9UNP9 301 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 BOLA2-SMG1P6H3BVE0 249 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 CCNDBP1O95273 360 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms