RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TTC7AQ9ULT0 858 aaPredicted RBP14.79□□□□□ -0.04
CHD3-205ENST00000449744 IQCF5A8MTL0 148 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 ISM1B1AKI9 464 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 RPN2P04844 631 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 CHRM5P08912 532 aaPredicted RBP14.78□□□□□ -0.04
CHD3-205ENST00000449744 MSL3P1P0C860 447 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 UGT2B7P16662 529 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 TPSB2P20231 275 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 NMBRP28336 390 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 PTPN4P29074 926 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 VPS41P49754 854 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 ABRQ12979 859 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 GPS2Q13227 327 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 TPSAB1Q15661 275 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 PRAMEF17Q5VTA0 474 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 LRRC8BQ6P9F7 803 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 PTRH1Q86Y79 214 aaKnown RBP14.78□□□□□ -0.04
CHD3-205ENST00000449744 SLC22A15Q8IZD6 547 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 KRT222Q8N1A0 295 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 MPP5Q8N3R9 675 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 C19orf47Q8N9M1 422 aaKnown RBP14.78□□□□□ -0.04
CHD3-205ENST00000449744 OR1L3Q8NH93 324 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 CFAP61Q8NHU2 1237 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 COL26A1Q96A83 441 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 PBKQ96KB5 322 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 LRFN5Q96NI6 719 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 ACTR5Q9H9F9 607 aaPredicted RBP14.78□□□□□ -0.04
CHD3-205ENST00000449744 ZNF71Q9NQZ8 489 aaPredicted RBP14.78□□□□□ -0.04
CHD3-205ENST00000449744 MARCH4Q9P2E8 410 aaPredicted RBP14.78□□□□□ -0.04
CHD3-205ENST00000449744 GNPTGQ9UJJ9 305 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 PLAGL1Q9UM63 463 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 FARSAQ9Y285 508 aaKnown RBP14.78□□□□□ -0.04
CHD3-205ENST00000449744 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 KCNMB2Q9Y691 235 aa14.78□□□□□ -0.04
CHD3-205ENST00000449744 E7EQ34 232 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 PYCARD-AS1I3L0S3 204 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 MEN1O00255 615 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 PFDN6O15212 129 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 SUV39H1O43463 412 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 KRT14P02533 472 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 FURINP09958 794 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 ITGA1P56199 1179 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 GPS1Q13098 491 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 TTC23LQ6PF05 361 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 CDHR3Q6ZTQ4 885 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 SDCCAG8Q86SQ7 713 aaPredicted RBP14.77□□□□□ -0.05
CHD3-205ENST00000449744 SYVN1Q86TM6 617 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 TRIM73Q86UV7 250 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 LRRC6Q86X45 466 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 GPR135Q8IZ08 494 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 DSELQ8IZU8 1212 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 LKAAEAR1Q8TD35 194 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 MAGOHBQ96A72 148 aaKnown RBP14.77□□□□□ -0.05
CHD3-205ENST00000449744 MFSD3Q96ES6 412 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 ABHD17AQ96GS6 310 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 TCTN2Q96GX1 697 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 OR2A14Q96R47 310 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 RUFY1Q96T51 708 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 CHST8Q9H2A9 424 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 MRM3Q9HC36 420 aaKnown RBP14.77□□□□□ -0.05
CHD3-205ENST00000449744 SYBUQ9NX95 663 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 SPHK1Q9NYA1 384 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 MAN2B2Q9Y2E5 1009 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 CFAP46Q8IYW2 2715 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 ATMQ13315 3056 aa14.77□□□□□ -0.05
CHD3-205ENST00000449744 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.76□□□□□ -0.05
CHD3-205ENST00000449744 A0A0J9YY10 115 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 TCRBV7S3A2A0A539 114 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 MKRN2OSH3BPM6 223 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 KPNA5O15131 536 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 GPC4O75487 556 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 VAPBO95292 243 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 HBQ1P09105 142 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 PAMP19021 973 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 AOAHP28039 575 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 RAB28P51157 221 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 EIF3BP55884 814 aaKnown RBP14.76□□□□□ -0.05
CHD3-205ENST00000449744 RPS18P62269 152 aaKnown RBP14.76□□□□□ -0.05
CHD3-205ENST00000449744 KIR2DS3Q14952 304 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 KCTD19Q17RG1 926 aaPredicted RBP14.76□□□□□ -0.05
CHD3-205ENST00000449744 PLEKHS1Q5SXH7 462 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 IZUMO3Q5VZ72 239 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 MRNIPQ6NTE8 343 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 CASC4Q6P4E1 433 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 CES3Q6UWW8 571 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 UNC5DQ6UXZ4 953 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 TMEM135Q86UB9 458 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 VRK3Q8IV63 474 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 DCUN1D3Q8IWE4 304 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 SLC38A9Q8NBW4 561 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 SKA2Q8WVK7 121 aaPredicted RBP14.76□□□□□ -0.05
CHD3-205ENST00000449744 THAP4Q8WY91 577 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 NAP1L3Q99457 506 aaPredicted RBP14.76□□□□□ -0.05
CHD3-205ENST00000449744 KIFC1Q9BW19 673 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 TRIM4Q9C037 500 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 P2RY12Q9H244 342 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 IRAK4Q9NWZ3 460 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 SLC39A10Q9ULF5 831 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 SOX13Q9UN79 622 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 SNX7Q9UNH6 387 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms