RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MAPK15Q8TD08 544 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ADIPOR1Q96A54 375 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 DYNLL2Q96FJ2 89 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TM9SF2Q99805 663 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TMEM246Q9BRR3 403 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ZNF670Q9BS34 389 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 CADM1Q9BY67 442 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 DBNDD1Q9H9R9 158 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PTCH1Q13635 1447 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ZNF99A8MXY4 864 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 DCDC2CA8MYV0 355 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ISM1B1AKI9 464 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 C19orf81C9J6K1 198 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 MEN1O00255 615 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SLC25A27O95847 323 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SRPRAP08240 638 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 SBK2P0C263 348 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SUPT20HL2P0C7V6 817 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 NCEH1Q6PIU2 408 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 OR13C3Q8NGS6 347 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 C7orf34Q96L11 122 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 UBXN10Q96LJ8 280 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PARK7Q99497 189 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 FUNDC2Q9BWH2 189 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 LDAHQ9H6V9 325 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 FBXO7Q9Y3I1 522 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PCDHB9Q9Y5E1 797 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 LRRN3E7EW58 273 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PEX11AO75192 247 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 CHRNB2P17787 502 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 CHRFAM7AQ494W8 412 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 UBE2J2Q8N2K1 259 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SLC35F5Q8WV83 523 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SCRN2Q96FV2 425 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 EPYCQ99645 322 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PCBD2Q9H0N5 130 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 LRRN3Q9H3W5 708 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SRRDQ9UH36 339 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 CNOT6Q9ULM6 557 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 BEST1O76090 585 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TNFRSF8P28908 595 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ASPAP45381 313 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PSEN1P49768 467 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 HSD11B2P80365 405 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SLC1A5Q15758 541 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PRPF38BQ5VTL8 546 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 CAPN13Q6MZZ7 669 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 ZBTB46Q86UZ6 589 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 FAM35AQ86V20 835 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TCTE3Q8IZS6 198 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 GLYATL2Q8WU03 294 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 DDX1Q92499 740 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 NCSTNQ92542 709 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 FAM122AQ96E09 287 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 TCF25Q9BQ70 676 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ADAM19Q9H013 955 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 RUVBL1Q9Y265 456 aaKnown RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 CHD4Q14839 1912 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ANKRD34BA5PLL1 514 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ELOA3DA6NLF2 546 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 TULP2O00295 520 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 GSTM3P21266 225 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 HTRA4P83105 476 aaPredicted RBP8.8□□□□□ -1
NIPBL-202ENST00000448238 ELOA3BQ3SY89 546 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 AMIGO2Q86SJ2 522 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 LIX1Q8N485 282 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ELOA3Q8NG57 546 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 OR8K3Q8NH51 312 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 SPATA20Q8TB22 786 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 ELOVL4Q9GZR5 314 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 MTG2Q9H4K7 406 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 PLCXD1Q9NUJ7 323 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 EGFL7Q9UHF1 273 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 CFAP43Q8NDM7 1665 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 MPDZO75970 2070 aa8.8□□□□□ -1
NIPBL-202ENST00000448238 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 DPPA5A6NC42 116 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 DLGAP1O14490 977 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CD47Q08722 323 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 MFSD13AQ14CX5 517 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 UPP1Q16831 310 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 RALGPS1Q5JS13 557 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 RAET1GQ6H3X3 334 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 BEST3Q8N1M1 668 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SYT3Q9BQG1 590 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ABCG8Q9H221 673 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 KLHL13Q9P2N7 655 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 PCDHGA2Q9Y5H1 932 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 PPP1R3GB7ZBB8 358 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CLEC3AO75596 197 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ALDH2P05091 517 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SLC25A3Q00325 362 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 CBX2Q14781 532 aaPredicted RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 LRRC66Q68CR7 880 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 SSX9Q7RTT3 188 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 EGFL6Q8IUX8 553 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 PSTKQ8IV42 348 aaKnown RBP8.79□□□□□ -1
NIPBL-202ENST00000448238 CADM2Q8N3J6 435 aa8.79□□□□□ -1
NIPBL-202ENST00000448238 ASCC1Q8N9N2 400 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms