RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CMTM6Q9NX76 183 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 LRCH1Q9Y2L9 728 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 ATG13O75143 517 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 RSL1D1O76021 490 aaKnown RBP17.04■□□□□ 0.32
SMC6-206ENST00000446852 RECQL5O94762 991 aaPredicted RBP17.04■□□□□ 0.32
SMC6-206ENST00000446852 GSTM1P09488 218 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 GJA4P35212 333 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 GSTM4Q03013 218 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 CPSF6Q16630 551 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMC6-206ENST00000446852 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.04■□□□□ 0.32
SMC6-206ENST00000446852 SYCE2Q6PIF2 218 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 ZFAND4Q86XD8 727 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 LILRA2Q8N149 483 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 MCOLN3Q8TDD5 553 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 PPP3R2Q96LZ3 170 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 GID8Q9NWU2 228 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 SLAMF8Q9P0V8 285 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 CROCCQ5TZA2 2017 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 PRSS51A0A1B0GVH4 220 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 ARHGEF33A8MVX0 844 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 QSOX1O00391 747 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 RGS14O43566 566 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 C6P13671 934 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 SLC2A4P14672 509 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 AP1S2P56377 157 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 ELP6Q0PNE2 266 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 TRAP1Q12931 704 aaKnown RBP17.03■□□□□ 0.32
SMC6-206ENST00000446852 RUNX3Q13761 415 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 SYTL3Q4VX76 610 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 PRMT9Q6P2P2 845 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 TTC23LQ6PF05 361 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 MMAAQ8IVH4 418 aaKnown RBP17.03■□□□□ 0.32
SMC6-206ENST00000446852 RGL4Q8IZJ4 473 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 SLC29A3Q9BZD2 475 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 ATG10Q9H0Y0 220 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 C6orf203Q9P0P8 240 aaPredicted RBP17.03■□□□□ 0.32
SMC6-206ENST00000446852 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 GULP1Q9UBP9 304 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 RIMS3Q9UJD0 308 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 CDH7Q9ULB5 785 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 SLC22A14Q9Y267 594 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 PRAMEF4O60810 478 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 MMP20O60882 483 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 C8BP07358 591 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 ITPKAP23677 461 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 ABRQ12979 859 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 PRKG2Q13237 762 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 NFYCQ13952 458 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 SFT2D3Q587I9 215 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 PRAMEF9Q5VWM5 478 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 ANO7Q6IWH7 933 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 TMEM220Q6QAJ8 160 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 CYP2R1Q6VVX0 501 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 CPA6Q8N4T0 437 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 MTFMTQ96DP5 389 aaKnown RBP17.03■□□□□ 0.32
SMC6-206ENST00000446852 NUS1Q96E22 293 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 CDCA3Q99618 268 aaPredicted RBP17.03■□□□□ 0.32
SMC6-206ENST00000446852 CCM2Q9BSQ5 444 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 TMEM45AQ9NWC5 275 aa17.03■□□□□ 0.32
SMC6-206ENST00000446852 KCNE1BA0A087WTH5 132 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 SLC5A10A0PJK1 596 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 PABPN1LA6NDY0 278 aaKnown RBP17.02■□□□□ 0.32
SMC6-206ENST00000446852 EIF4E1BA6NMX2 242 aaKnown RBP17.02■□□□□ 0.32
SMC6-206ENST00000446852 SLC28A1O00337 649 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 PSIP1O75475 530 aaKnown RBP17.02■□□□□ 0.32
SMC6-206ENST00000446852 FOXM1Q08050 763 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 PTGR1Q14914 329 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 PLA2G4EQ3MJ16 856 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 NLRP8Q86W28 1048 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 PDSS2Q86YH6 399 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 GLMNQ92990 594 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 TMEM159Q96B96 161 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 KLHL4Q9C0H6 718 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 COPS7BQ9H9Q2 264 aaPredicted RBP17.02■□□□□ 0.32
SMC6-206ENST00000446852 LEF1Q9UJU2 399 aaPredicted RBP17.02■□□□□ 0.32
SMC6-206ENST00000446852 PCDHA9Q9Y5H5 950 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 DOCK9Q9BZ29 2069 aa17.02■□□□□ 0.32
SMC6-206ENST00000446852 EYSQ5T1H1 3165 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 ATG2BQ96BY7 2078 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 PDYNP01213 254 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 PBLDP30039 288 aaPredicted RBP17.02■□□□□ 0.31
SMC6-206ENST00000446852 CASP2P42575 452 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 PFN3P60673 137 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 MAP7D1Q3KQU3 841 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 CCSMST1Q4G0I0 132 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 ZNF658BQ4V348 819 aaPredicted RBP17.02■□□□□ 0.31
SMC6-206ENST00000446852 RABL3Q5HYI8 236 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 OGFRL1Q5TC84 451 aaPredicted RBP17.02■□□□□ 0.31
SMC6-206ENST00000446852 KIAA2013Q8IYS2 634 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 DNAJB14Q8TBM8 379 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 SUSD6Q92537 303 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 TMEM125Q96AQ2 219 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 PPP1R16AQ96I34 528 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 MYADMQ96S97 322 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 KXD1Q9BQD3 176 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 ACPTQ9BZG2 426 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 PRSS16Q9NQE7 514 aa17.02■□□□□ 0.31
SMC6-206ENST00000446852 CKAP5Q14008 2032 aa17.01■□□□□ 0.31
SMC6-206ENST00000446852 EPHX1P07099 455 aa17.01■□□□□ 0.31
SMC6-206ENST00000446852 JAK1P23458 1154 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms