RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 WDR20Q8TBZ3 569 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 HM13Q8TCT9 377 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 HEXDCQ8WVB3 486 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 ST6GALNAC6Q969X2 333 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 RHBDF1Q96CC6 855 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 RUFY1Q96T51 708 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 OLFM1Q99784 485 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 HSD3B7Q9H2F3 369 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 PCDH9Q9HC56 1237 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 TAS2R3Q9NYW6 316 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 POLLQ9UGP5 575 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 RPH3AQ9Y2J0 694 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 AP1M2Q9Y6Q5 423 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 NCAPD3P42695 1498 aa4.3□□□□□ -1.72
HMGB1P48-201ENST00000446155 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 GOLGA6L9A6NEM1 432 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 M0QZ24 198 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 MPHOSPH10O00566 681 aaKnown RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 PLPP2O43688 288 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 AKAP3O75969 853 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 KCNK5O95279 499 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 ALPPP05187 535 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 LINC00271P0C7V0 271 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 ALPPL2P10696 532 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 CYP11B2P19099 503 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 AZGP1P25311 298 aaKnown RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 CTNNB1P35222 781 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 IL15P40933 162 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 RABIFP47224 123 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 TKTL1P51854 596 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 PTENP60484 403 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 DLG1Q12959 904 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 UGCGQ16739 394 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 WSCD2Q2TBF2 565 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF789Q5FWF6 425 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 FRG2Q64ET8 278 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 KCTD18Q6PI47 426 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 TMEM182Q6ZP80 229 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 ARMC9Q7Z3E5 817 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 TLK2Q86UE8 772 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 BEST3Q8N1M1 668 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 EXD1Q8NHP7 514 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 SLC13A3Q8WWT9 602 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 ATL1Q8WXF7 558 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 BCL2L2Q92843 193 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 CENPTQ96BT3 561 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 BICD1Q96G01 975 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 BSCL2Q96G97 398 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 MED30Q96HR3 178 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 THOC3Q96J01 351 aaKnown RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 MUS81Q96NY9 551 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 CSF3RQ99062 836 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 MEIS3Q99687 375 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 MINDY3Q9H8M7 445 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 SEBOXQ9HB31 216 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 ACSS1Q9NUB1 689 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 COMMD8Q9NX08 183 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 MCM9Q9NXL9 1143 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 STK39Q9UEW8 545 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 FBXW2Q9UKT8 454 aa4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 TTC7AQ9ULT0 858 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P48-201ENST00000446155 THOC2Q8NI27 1593 aaKnown RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SLC9B1P1A6NJY1 282 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 EIF4E1BA6NMX2 242 aaKnown RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 C4orf47A7E2U8 309 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 K7EPI3 171 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 CLDN4O14493 209 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 PTGESO14684 152 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 MID1O15344 667 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 NDUFS4O43181 175 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SELENOFO60613 162 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 KDM4BO94953 1096 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 CLDN14O95500 239 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SLC16A8O95907 504 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 HEXBP07686 556 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 DANCRP0C864 163 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 T-ENOLP0DO92 83 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 TCF4P15884 667 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 EPORP19235 508 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 CCNA2P20248 432 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 TIA1P31483 386 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 GABRA5P31644 462 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 WNT5AP41221 380 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 FRKP42685 505 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 ATXN3P54252 364 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF155Q12901 538 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 GRIK2Q13002 908 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SLC39A14Q15043 492 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 PDK1Q15118 436 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SGCBQ16585 318 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 CALCRLQ16602 461 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 DECR1Q16698 335 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 CDO1Q16878 200 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 AARDQ4LEZ3 155 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 RNASEH2BQ5TBB1 312 aaKnown RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 C9orf57Q5W0N0 161 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 NSUN5P2Q63ZY6 315 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF324BQ6AW86 544 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 LCN10Q6JVE6 187 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms