RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ABCD2Q9UBJ2 740 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 POLR3HQ9Y535 204 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-206ENST00000441580 BPTFQ12830 3046 aa12.86□□□□□ -0.35
CPSF4-206ENST00000441580 COL4A2P08572 1712 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 C17orf113A0A1B0GUU1 675 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 SERTM1A2A2V5 107 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 KLHL33A6NCF5 533 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 GPR89AB7ZAQ6 455 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 NPIPB8E9PQR5 432 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 H3BM21 787 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 MMP20O60882 483 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 NPPAP01160 153 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 GPR89BP0CG08 455 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CD1EP15812 388 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 ACADSP16219 412 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 XRCC1P18887 633 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 PRPH2P23942 346 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 PBLDP30039 288 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 DPP6P42658 865 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 GDF5P43026 501 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 POLR2JP52435 117 aaKnown RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 DIO3P55073 304 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 RPL38P63173 70 aaKnown RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 BNIP2Q12982 314 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 ABRAXAS2Q15018 415 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 AGERQ15109 404 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CST6Q15828 149 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 PTCHD3Q3KNS1 767 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 ZNF658BQ4V348 819 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CACHD1Q5VU97 1274 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 NAIF1Q69YI7 327 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 TMEM220Q6QAJ8 160 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 PARM1Q6UWI2 310 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 Q6ZSR9 355 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CHPFQ8IZ52 775 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 MINDY1Q8N5J2 469 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 BEND7Q8N7W2 519 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 ZNF513Q8N8E2 541 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 GLB1L3Q8NCI6 653 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 S1PR5Q9H228 398 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 DPEP2Q9H4A9 486 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 ELOVL6Q9H5J4 265 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 TRIM39Q9HCM9 518 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 NMRK1Q9NWW6 199 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 C6orf203Q9P0P8 240 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CLEC1BQ9P126 229 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 TMEM181Q9P2C4 612 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 ZNF490Q9ULM2 529 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 CNOT6Q9ULM6 557 aaKnown RBP12.85□□□□□ -0.35
CPSF4-206ENST00000441580 GPR34Q9UPC5 381 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 COQ6Q9Y2Z9 468 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 TICRRQ7Z2Z1 1910 aa12.85□□□□□ -0.35
CPSF4-206ENST00000441580 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 ZFC3H1O60293 1989 aaKnown RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 KCNE1BA0A087WTH5 132 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 LOC730098B7Z3J9 87 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 E7ENX8 843 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 RFXAPO00287 272 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 FFAR3O14843 346 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 GPR42O15529 346 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 DNAJA2O60884 412 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 LILRB5O75023 590 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 JUPP14923 745 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 EPORP19235 508 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 GNPDA1P46926 289 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 PREPP48147 710 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 SLC7A2P52569 658 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 NME5P56597 212 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 CSTF3Q12996 717 aaKnown RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 RPA4Q13156 261 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 NFYCQ13952 458 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 STARD3Q14849 445 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 TAF11Q15544 211 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 AP5B1Q2VPB7 878 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 ZNF648Q5T619 568 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 C10orf62Q5T681 223 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 AGBL4Q5VU57 503 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 LIPJQ5W064 366 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 FAM219BQ5XKK7 198 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 CYP20A1Q6UW02 462 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 SCIMPQ6UWF3 145 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 UNC5DQ6UXZ4 953 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 TRMT11Q7Z4G4 463 aaKnown RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 KBTBD6Q86V97 674 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 RETREG3Q86VR2 466 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 TMEM126BQ8IUX1 230 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 SFTPA1Q8IWL2 248 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 DNAJC9Q8WXX5 260 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 FGF14Q92915 247 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 CHFRQ96EP1 664 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 HIC2Q96JB3 615 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 P2RY13Q9BPV8 354 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 GPATCH1Q9BRR8 931 aaKnown RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 OR2AG1Q9H205 316 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 LRTM1Q9HBL6 345 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms