RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 LPGAT1Q92604 370 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 N4BP2L2Q92802 583 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-216ENST00000439475 PMEPA1Q969W9 287 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 LRRC39Q96DD0 335 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 WBP1Q96G27 269 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 SNF8Q96H20 258 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 ELMO2Q96JJ3 720 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 EBNA1BP2Q99848 306 aaKnown RBP10.15□□□□□ -0.78
MCF2L-216ENST00000439475 FAM167BQ9BTA0 163 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 TUBB2BQ9BVA1 445 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 RAB11FIP5Q9BXF6 653 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 SPRY4Q9C004 299 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 SLC7A5P2Q9GIP4 190 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 XKR8Q9H6D3 395 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 GPN2Q9H9Y4 310 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-216ENST00000439475 LATS2Q9NRM7 1088 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 KLHL42Q9P2K6 505 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 LNPEPQ9UIQ6 1025 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 SERTAD3Q9UJW9 196 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 PADI1Q9ULC6 663 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 BTRCQ9Y297 605 aa10.15□□□□□ -0.78
MCF2L-216ENST00000439475 SDK2Q58EX2 2172 aa10.15□□□□□ -0.79
MCF2L-216ENST00000439475 ZCWPW2A0A1B0GU75 182 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 TTI1O43156 1089 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 KIAA0754O94854 1291 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 S1PR4O95977 384 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 KLK3P07288 261 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-216ENST00000439475 FOLR1P15328 257 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 CD9P21926 228 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 RAB28P51157 221 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 ARL4CP56559 192 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 CTBP1Q13363 440 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 KIR2DS3Q14952 304 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 KYNUQ16719 465 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 BBS9Q3SYG4 887 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 HSP90AA5PQ58FG0 334 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 CTSL3PQ5NE16 218 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 SPESP1Q6UW49 350 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 SYT10Q6XYQ8 523 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 CENPUQ71F23 418 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 VASH2Q86V25 355 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 KCNMB4Q86W47 210 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 ADGRF3Q8IZF5 1079 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 ZBTB2Q8N680 514 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 LKAAEAR1Q8TD35 194 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 BIRC8Q96P09 236 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 KRT12Q99456 494 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 ARHGAP9Q9BRR9 750 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 IARS2Q9NSE4 1012 aaKnown RBP10.14□□□□□ -0.79
MCF2L-216ENST00000439475 INTS7Q9NVH2 962 aaKnown RBP10.14□□□□□ -0.79
MCF2L-216ENST00000439475 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-216ENST00000439475 FBXO5Q9UKT4 447 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 ICKQ9UPZ9 632 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 CDYLQ9Y232 598 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 PCDHB3Q9Y5E6 796 aa10.14□□□□□ -0.79
MCF2L-216ENST00000439475 A0A0J9YY10 115 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 ZNF891A8MT65 544 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 TK2O00142 265 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 NIPSNAP2O75323 286 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 VPS26AO75436 327 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 FKBP9O95302 570 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 DLGAP3O95886 979 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 CHRM5P08912 532 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 HBQ1P09105 142 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 EBLN1P0CF75 366 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 IVDP26440 423 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 ATP5DP30049 168 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 ITGA8P53708 1063 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 CKAP4Q07065 602 aaKnown RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 CALCOCO2Q13137 446 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 KCNAB1Q14722 419 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 HIF1AQ16665 826 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 SLC5A12Q1EHB4 618 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 HIBCHQ6NVY1 386 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 FBXO38Q6PIJ6 1188 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 TIPARPQ7Z3E1 657 aaKnown RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 TMEM126BQ8IUX1 230 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 VRK3Q8IV63 474 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 DENND6AQ8IWF6 608 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 GPR135Q8IZ08 494 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 GALNT6Q8NCL4 622 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 SPATA4Q8NEY3 305 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 KCNJ9Q92806 393 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 INPP5DQ92835 1189 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 ZNF501Q96CX3 271 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 TCTN2Q96GX1 697 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 CATSPER2Q96P56 530 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 TRAPPC9Q96Q05 1148 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 PITPNM3Q9BZ71 974 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 TRIM31Q9BZY9 425 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 PPANQ9NQ55 473 aaKnown RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 FBXO6Q9NRD1 293 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-216ENST00000439475 IL1RAPL1Q9NZN1 696 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 KCND3Q9UK17 655 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 SPEGQ15772 3267 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 AHCTF1Q8WYP5 2266 aa10.13□□□□□ -0.79
MCF2L-216ENST00000439475 CEP295Q9C0D2 2601 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 LOC101059948A0A1B0GTJ6 334 aa10.12□□□□□ -0.79
MCF2L-216ENST00000439475 ZNF839A8K0R7 811 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms