RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ZBED5Q49AG3 693 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 AASDHQ4L235 1098 aaPredicted RBP10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 SPANXN4Q5MJ08 99 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 DEPDC1Q5TB30 811 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 GPR107Q5VW38 600 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 SUSD1Q6UWL2 747 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 ABRAXAS1Q6UWZ7 409 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 GPR180Q86V85 440 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 ALDH16A1Q8IZ83 802 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 ADAMTS16Q8TE57 1224 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 NEURL2Q9BR09 285 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 TNKS2Q9H2K2 1166 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 POLR1BQ9H9Y6 1135 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 CXorf21Q9HAI6 301 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 KLQ9UEF7 1012 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 MBD1Q9UIS9 605 aaPredicted RBP10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 CDH23Q9H251 3354 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 AREL1O15033 823 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 GREM1O60565 184 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 AOC2O75106 756 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 MBL2P11226 248 aaPredicted RBP10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 ZNF12P17014 697 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 MAP4P27816 1152 aaKnown RBP10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 RAB39AQ14964 217 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 NEDD8Q15843 81 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 ARMC12Q5T9G4 340 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 TMCO2Q7Z6W1 182 aaPredicted RBP10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 PHACTR4Q8IZ21 702 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 ITFG1Q8TB96 612 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 GTF2H4Q92759 462 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 AURKBQ96GD4 344 aaPredicted RBP10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 ZFYVE1Q9HBF4 777 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 MAGEE1Q9HCI5 957 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 SCHIP1Q9P0W5 487 aaPredicted RBP10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 YIPF1Q9Y548 306 aa10.2□□□□□ -0.78
CLSTN1-203ENST00000435891 LOC730098B7Z3J9 87 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ARNTLO00327 626 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 OTCP00480 354 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 C1QCP02747 245 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CDH1P12830 882 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 BPIP17213 487 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 GGT1P19440 569 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CD247P20963 164 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 JAK1P23458 1154 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 HNF1BP35680 557 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 GSSP48637 474 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ARSFP54793 590 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 PWP1Q13610 501 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CHRNA6Q15825 494 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ZXDCQ2QGD7 858 aaPredicted RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 INO80DQ53TQ3 878 aaPredicted RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 TXNDC8Q6A555 127 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 TMC5Q6UXY8 1006 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 RFLNAQ6ZTI6 216 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 TMEM26Q6ZUK4 368 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 PROSER1Q86XN7 944 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 SLC22A15Q8IZD6 547 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 STK40Q8N2I9 435 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ARL14EPQ8N8R7 260 aaPredicted RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 TNIP2Q8NFZ5 429 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 OR10Q1Q8NGQ4 319 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CD99L2Q8TCZ2 262 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 AUTS2Q8WXX7 1259 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 SMURF2Q9HAU4 748 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 SRRDQ9UH36 339 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 N6AMT1Q9Y5N5 214 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 A0A1W2PPW3 197 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 PSMD11O00231 422 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 RAD51BO15315 384 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 EFEMP2O95967 443 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 MYCP01106 439 aaPredicted RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 TPTEP56180 551 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 PHC1P78364 1004 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 TAF12Q16514 161 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 KIAA1841Q6NSI8 718 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.19□□□□□ -0.782e-8■■□□□ 12.4
CLSTN1-203ENST00000435891 KCTD8Q6ZWB6 473 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 STK32CQ86UX6 486 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 HEATR4Q86WZ0 1026 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 LIX1Q8N485 282 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 SLC13A3Q8WWT9 602 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 RHBDF1Q96CC6 855 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CD320Q9NPF0 282 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 DNMT3BQ9UBC3 853 aaKnown RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 MAGEL2Q9UJ55 1249 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 TNPO3Q9Y5L0 923 aaKnown RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ALPLP05186 524 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ZNF7P17097 686 aaPredicted RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 MTHFRP42898 656 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ALDH7A1P49419 539 aaKnown RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 NKX2-5P52952 324 aaPredicted RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CCL23P55773 120 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CDH18Q13634 790 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 SF3B4Q15427 424 aaKnown RBP eCLIP10.19□□□□□ -0.783e-7■■■■■ 34.3
CLSTN1-203ENST00000435891 KCNJ8Q15842 424 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CDKN3Q16667 212 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 CLPPQ16740 277 aaPredicted RBP10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 RGL4Q8IZJ4 473 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 ZNF461Q8TAF7 563 aa10.19□□□□□ -0.78
CLSTN1-203ENST00000435891 OSCP1Q8WVF1 389 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms