RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 ING2Q9H160 280 aa13.89□□□□□ -0.19
LINC01006-204ENST00000435354 MLXIPLQ9NP71 852 aa13.89□□□□□ -0.19
LINC01006-204ENST00000435354 SPHK1Q9NYA1 384 aa13.89□□□□□ -0.19
LINC01006-204ENST00000435354 IMPACTQ9P2X3 320 aa13.89□□□□□ -0.19
LINC01006-204ENST00000435354 SERTAD3Q9UJW9 196 aa13.89□□□□□ -0.19
LINC01006-204ENST00000435354 TCFL5Q9UL49 500 aa13.89□□□□□ -0.19
LINC01006-204ENST00000435354 RP1L1Q8IWN7 2480 aaPredicted RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 HEATR9A2RTY3 570 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 ZNF749O43361 778 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 GOT2P00505 430 aaKnown RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 IFNB1P01574 187 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 CTSBP07858 339 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 CHRM5P08912 532 aaPredicted RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 ETS1P14921 441 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 CDC25BP30305 580 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 FDFT1P37268 417 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 SRSF1Q07955 248 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 SEMA3AQ14563 771 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 NCF4Q15080 339 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 AFTPHQ6ULP2 937 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 SLC13A5Q86YT5 568 aaPredicted RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 TBC1D21Q8IYX1 336 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 RNF10Q8N5U6 811 aaKnown RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 GLIS1Q8NBF1 620 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 OR5K2Q8NHB8 316 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 RANBP9Q96S59 729 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 FRMD8P1Q9BZ68 369 aaPredicted RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 CASS4Q9NQ75 786 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 RIMKLBQ9ULI2 386 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 PLAGL1Q9UM63 463 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 SNX7Q9UNH6 387 aa13.88□□□□□ -0.19
LINC01006-204ENST00000435354 PCDHGA9Q9Y5G4 932 aaKnown RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 USP9XQ93008 2570 aaPredicted RBP13.88□□□□□ -0.19
LINC01006-204ENST00000435354 E7EQ34 232 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 MAP3K7O43318 606 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 CEACAM4O75871 244 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 OR56A5P0C7T3 313 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 ADRA1DP25100 572 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 PEBP1P30086 187 aaKnown RBP13.87□□□□□ -0.19
LINC01006-204ENST00000435354 CD97P48960 835 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 CCL11P51671 97 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 PGDP52209 483 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 SNX1Q13596 522 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 UBAP2LQ14157 1087 aaKnown RBP13.87□□□□□ -0.19
LINC01006-204ENST00000435354 DEFB110Q30KQ9 67 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 SYTL3Q4VX76 610 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 SEL1L2Q5TEA6 688 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 LYPLAL1Q5VWZ2 237 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 PPP1R21Q6ZMI0 780 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 VRK3Q8IV63 474 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 ZBTB2Q8N680 514 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 LKAAEAR1Q8TD35 194 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 TCTN2Q96GX1 697 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 SLC25A23Q9BV35 468 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 CHRNA10Q9GZZ6 450 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 ACSS2Q9NR19 701 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 RAB6BQ9NRW1 208 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 OR6C2Q9NZP2 312 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 POLG2Q9UHN1 485 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 ZNF148Q9UQR1 794 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 CDYLQ9Y232 598 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 TDRKHQ9Y2W6 561 aaKnown RBP13.87□□□□□ -0.19
LINC01006-204ENST00000435354 SHANK1Q9Y566 2161 aa13.87□□□□□ -0.19
LINC01006-204ENST00000435354 ANKRD12Q6UB98 2062 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 TMEM63AO94886 807 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 GAS8O95995 478 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 ZSCAN5DPP0CG00 497 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 CCR7P32248 378 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 CSE1LP55060 971 aaKnown RBP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 PLOD1Q02809 727 aaPredicted RBP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 SIX1Q15475 284 aaPredicted RBP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 NADK2Q4G0N4 442 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 LDB1Q86U70 411 aaPredicted RBP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 SLC22A15Q8IZD6 547 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 OR6P1Q8NGX9 317 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 OR4L1Q8NH43 312 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 COL26A1Q96A83 441 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 SGSM3Q96HU1 749 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 DPH2Q9BQC3 489 aaPredicted RBP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 SPRTNQ9H040 489 aaPredicted RBP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 MARCH4Q9P2E8 410 aaPredicted RBP13.86□□□□□ -0.19
LINC01006-204ENST00000435354 ANKMY1Q9P2S6 941 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 GUCA1BQ9UMX6 200 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 TCAF1Q9Y4C2 921 aa13.86□□□□□ -0.19
LINC01006-204ENST00000435354 USP9YO00507 2555 aaPredicted RBP13.85□□□□□ -0.19
LINC01006-204ENST00000435354 A0A0J9YY10 115 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 IQCF5A8MTL0 148 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 E7EVH7 732 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 GPC4O75487 556 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 KLF7O75840 302 aaPredicted RBP13.85□□□□□ -0.19
LINC01006-204ENST00000435354 OR2B3O76000 313 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 APRTP07741 180 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 HBQ1P09105 142 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 CBSLP0DN79 551 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 PKLRP30613 574 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 RPL22P35268 128 aaKnown RBP13.85□□□□□ -0.19
LINC01006-204ENST00000435354 CBSP35520 551 aa13.85□□□□□ -0.19
LINC01006-204ENST00000435354 ATP1A4Q13733 1029 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms