RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SLC35F6Q8N357 371 aa21.43■■□□□ 1.02
SEMA3B-205ENST00000434030 SLC38A9Q8NBW4 561 aa21.43■■□□□ 1.02
SEMA3B-205ENST00000434030 KLHL25Q9H0H3 589 aa21.43■■□□□ 1.02
SEMA3B-205ENST00000434030 FANCEQ9HB96 536 aa21.43■■□□□ 1.02
SEMA3B-205ENST00000434030 SYTL2Q9HCH5 934 aa21.43■■□□□ 1.02
SEMA3B-205ENST00000434030 FER1L5A0AVI2 2057 aa21.43■■□□□ 1.02
SEMA3B-205ENST00000434030 MAP3K7O43318 606 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 AVILO75366 819 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 NDUFS3O75489 264 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 APOA4P06727 396 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 CHRM5P08912 532 aaPredicted RBP21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 FURINP09958 794 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 COILP38432 576 aaPredicted RBP21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 ERV3-1Q14264 604 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 DNAJC21Q5F1R6 531 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 PRAMEF17Q5VTA0 474 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 ANKRD22Q5VYY1 191 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 PTRHD1Q6GMV3 140 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 CAND1Q86VP6 1230 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 MPP5Q8N3R9 675 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 COG1Q8WTW3 980 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 OR2A14Q96R47 310 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 NAP1L3Q99457 506 aaPredicted RBP21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 TWSG1Q9GZX9 223 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 SLC25A18Q9H1K4 315 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 SPHK1Q9NYA1 384 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 OR6C2Q9NZP2 312 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 PLAGL1Q9UM63 463 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 NEU2Q9Y3R4 380 aa21.42■■□□□ 1.02
SEMA3B-205ENST00000434030 C21orf140B9A014 251 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 TMEM150CB9EJG8 249 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 GOLGA8KD6RF30 607 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 GOLGA8TH3BQL2 631 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 CREG1O75629 220 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 SLCO2B1O94956 709 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 UGT2B7P16662 529 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 RPS3P23396 243 aaKnown RBP eCLIP21.41■■□□□ 1.021e-9■■■■■ 32.2
SEMA3B-205ENST00000434030 ABRQ12979 859 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 GPS2Q13227 327 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 CCDC137Q6PK04 289 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 ZNF517Q6ZMY9 492 aaPredicted RBP21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 OR1L3Q8NH93 324 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 FLVCR1-AS1Q8TAF5 88 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 CPT1BQ92523 772 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 OSBPL9Q96SU4 736 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 RUFY1Q96T51 708 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 KCNF1Q9H3M0 494 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 GNPTGQ9UJJ9 305 aa21.41■■□□□ 1.02
SEMA3B-205ENST00000434030 HELZ2Q9BYK8 2649 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 PGRMC1O00264 195 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 ZSCAN12O43309 604 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 KDM1AO60341 852 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 KCNAB2Q13303 367 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 KYNUQ16719 465 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 ZNF789Q5FWF6 425 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 CDHR3Q6ZTQ4 885 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 TRIM73Q86UV7 250 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 HOOK3Q86VS8 718 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 LRRC6Q86X45 466 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 CFAP61Q8NHU2 1237 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 ACTRT1Q8TDG2 376 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 APOBEC4Q8WW27 367 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 LRFN5Q96NI6 719 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 PANX3Q96QZ0 392 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 GPR87Q9BY21 358 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 FAM117AQ9C073 453 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 TUBD1Q9UJT1 453 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 SERTAD3Q9UJW9 196 aa21.4■■□□□ 1.02
SEMA3B-205ENST00000434030 TMEM63AO94886 807 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 RECKO95980 971 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 KLK3P07288 261 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 NFKB2Q00653 900 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 PLEKHS1Q5SXH7 462 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 ARMC3Q5W041 872 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 KIAA0930Q6ICG6 404 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 MRNIPQ6NTE8 343 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 UNC5DQ6UXZ4 953 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 SDCCAG8Q86SQ7 713 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 DSELQ8IZU8 1212 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 OTUD6BQ8N6M0 293 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 MR1Q95460 341 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 BIRC8Q96P09 236 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 MENTQ9BUN1 341 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 ACTL8Q9H568 366 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 FAM60AQ9NP50 221 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 TRMT1Q9NXH9 659 aaKnown RBP21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 KCNMB2Q9Y691 235 aa21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 TLN1Q9Y490 2541 aaKnown RBP21.39■■□□□ 1.01
SEMA3B-205ENST00000434030 MED13Q9UHV7 2174 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 ISM1B1AKI9 464 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 MEN1O00255 615 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 KPNA5O15131 536 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 RPN2P04844 631 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 MLNP12872 115 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 PTPN4P29074 926 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 PEBP1P30086 187 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 EIF3BP55884 814 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 GRB7Q14451 532 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 TMED2Q15363 201 aa21.38■■□□□ 1.01
SEMA3B-205ENST00000434030 ZIC1Q15915 447 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms