RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 PTGES3LE9PB15 166 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 F8W810 466 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 SHOXO15266 292 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 USP12O75317 370 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 LRIG2O94898 1065 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 TRAPPC2P0DI81 140 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 TRAPPC2BP0DI82 140 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 RAP2AP10114 183 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 GOT1P17174 413 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 JUNDP17535 347 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 RPL17P18621 184 aaKnown RBP7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 POLR2CP19387 275 aaPredicted RBP7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 NMBRP28336 390 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 TGFBR2P37173 567 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 MRPL19P49406 292 aaKnown RBP7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 ST13P50502 369 aaKnown RBP7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 ZNF135P52742 658 aaPredicted RBP7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 OR2B6P58173 313 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 LILRA4P59901 499 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC35A2P78381 396 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 MVKQ03426 396 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 GPR17Q13304 367 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 FAM83EQ2M2I3 478 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 SMU1Q2TAY7 513 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 RABL3Q5HYI8 236 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 CERCAMQ5T4B2 595 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 ZNF470Q6ECI4 717 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 BLOC1S3Q6QNY0 202 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 CD300LGQ6UXG3 332 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 PRR23BQ6ZRT6 265 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 ZDHHC13Q8IUH4 622 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 PLD3Q8IV08 490 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 CLYBLQ8N0X4 340 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 FBXL6Q8N531 539 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 CCDC185Q8N715 623 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 DNAAF3Q8N9W5 541 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 C3orf58Q8NDZ4 430 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 MCOLN3Q8TDD5 553 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 SHDQ96IW2 340 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 B3GALT6Q96L58 329 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 CCDC90BQ9GZT6 254 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 MKRN2Q9H000 416 aaKnown RBP7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 DUSP21Q9H596 190 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 EPS8L2Q9H6S3 715 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 KAT8Q9H7Z6 458 aaKnown RBP7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 AKTIPQ9H8T0 292 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 CYP3A43Q9HB55 503 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 LTB4R2Q9NPC1 389 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 ATP13A2Q9NQ11 1180 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 TSPAN16Q9UKR8 245 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 DUSP12Q9UNI6 340 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 INSL5Q9Y5Q6 135 aa7.56□□□□□ -1.2
CNKSR3-202ENST00000433165 TRANK1O15050 2925 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 LOC100130705A0A1B0GUX0 176 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 ATP6AP2A0A1C7CYW4 349 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 G3V2T6 193 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 H0Y626 953 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 UBFD1O14562 309 aaKnown RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC16A6O15403 523 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 SNX2O60749 519 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 MRPS14O60783 128 aaKnown RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 HUS1O60921 280 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 ATP6AP2O75787 350 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 TRIM16O95361 564 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 APOA1P02647 267 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 NFICP08651 508 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 BDNFP23560 247 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 GTF2E2P29084 291 aaKnown RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 ARL4AP40617 200 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 MASP1P48740 699 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 LHX1P48742 406 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 ATXN1P54253 815 aaKnown RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 DEFA1P59665 94 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 DEFA3P59666 94 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 GPLD1P80108 840 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 CDK5R2Q13319 367 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 GALNT3Q14435 633 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 LAMA3Q16787 3333 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 TYSND1Q2T9J0 566 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 PLEKHG6Q3KR16 790 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 CLEC6AQ6EIG7 209 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 PDZD4Q76G19 769 aaPredicted RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 SPATC1Q76KD6 591 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 GET4Q7L5D6 327 aaPredicted RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 PID1Q7Z2X4 250 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 IFNEQ86WN2 208 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC22A9Q8IVM8 553 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 NLGN4XQ8N0W4 816 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 SVOPLQ8N434 492 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 FAM109AQ8N4B1 249 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 TOP6BLQ8N6T0 577 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 PSD4Q8NDX1 1056 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 ZHX1-C8orf76Q96EF9 292 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 SPATA17Q96L03 361 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 SENP8Q96LD8 212 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 NSMCE2Q96MF7 247 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 HEXIM2Q96MH2 286 aaKnown RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 RBM4BQ9BQ04 359 aaKnown RBP7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 KIFC1Q9BW19 673 aa7.55□□□□□ -1.2
CNKSR3-202ENST00000433165 RBM4Q9BWF3 364 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms