RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 HCRTO43612 131 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 EIPR1Q53HC9 387 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 AKTIPQ9H8T0 292 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 SH3BGRLO75368 114 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 GALNT1Q10472 559 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 TEAD2Q15562 447 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 KIAA2013Q8IYS2 634 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 SP100P23497 879 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 TPP2P29144 1249 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 EEFSECP57772 596 aaKnown RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 ILF3Q12906 894 aaKnown RBP eCLIP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 NFATC2Q13469 925 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 NXPE1Q8N323 547 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 TRMT61BQ9BVS5 477 aaKnown RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 MEAF6Q9HAF1 191 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 STMN3Q9NZ72 180 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 A0A1W2PP18 115 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 SLC10A2Q12908 348 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 LIPJQ5W064 366 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 AMER2Q8N7J2 671 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 POF1BQ8WVV4 589 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 MGME1Q9BQP7 344 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 MATN2O00339 956 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 SLC25A12O75746 678 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 CHRNGP07510 517 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 PITRM1Q5JRX3 1037 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 CLLU1OSQ5K130 101 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 SPESP1Q6UW49 350 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 MBOAT1Q6ZNC8 495 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 GPRIN1Q7Z2K8 1008 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 CLVS1Q8IUQ0 354 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 TRAM1L1Q8N609 369 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 C7orf57Q8NEG2 295 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 KBTBD8Q8NFY9 601 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 CDCA3Q99618 268 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-208ENST00000430669 ZDHHC2Q9UIJ5 367 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 DHRS7Q9Y394 339 aa11.32□□□□□ -0.6
PTCH1-208ENST00000430669 RASGRP1O95267 797 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PWP1Q13610 501 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 TYW3Q6IPR3 259 aaKnown RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CCDC103Q8IW40 242 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 MIEF2Q96C03 454 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 SHDQ96IW2 340 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 GKN1Q9NS71 199 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ITM2AO43736 263 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 DLX3O60479 287 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 STC2O76061 302 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 IGFBP5P24593 272 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 XKR4Q5GH76 650 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF678Q5SXM1 525 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 C14orf80Q86SX3 495 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 LCN9Q8WX39 176 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 NSMCE3Q96MG7 304 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 VPS35Q96QK1 796 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 MYO7AQ13402 2215 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CENPXA8MT69 81 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PRR23D1E9PI22 279 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CLDN4O14493 209 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 TIPRLO75663 272 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PRR23D2P0DMB1 279 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 GPR150Q8NGU9 434 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 TSSK3Q96PN8 268 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CRNNQ9UBG3 495 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CHD5Q8TDI0 1954 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 IFNGP01579 166 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 MRPS15P82914 257 aaKnown RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 EMX2Q04743 252 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PDZK1Q5T2W1 519 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 FADS2P1A8MWK0 482 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 BCKDKO14874 412 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 KMOO15229 486 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PDPK1O15530 556 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ARHGEF15O94989 841 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ALFQ53S48 1182 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 EPHX4Q8IUS5 362 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ALDOAP04075 364 aaKnown RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CDH1P12830 882 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 KCTD19Q17RG1 926 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ISG20Q96AZ6 181 aaKnown RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PIWIL1Q96J94 861 aaKnown RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PLEKHG4BQ96PX9 1271 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 WDR6Q9NNW5 1121 aaKnown RBP11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CCL22O00626 93 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 OR10H3O60404 316 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 PRKAG1P54619 331 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 MOGSQ13724 837 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF540Q8NDQ6 660 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 TRPV1Q8NER1 839 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 ACTR3BQ9P1U1 418 aa11.31□□□□□ -0.6
PTCH1-208ENST00000430669 CLDN7O95471 211 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 MPIP34949 423 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 PSMD7P51665 324 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms