RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 SYTL3Q4VX76 610 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 DRICH1Q6PGQ1 229 aaPredicted RBP26.34■■□□□ 1.81
LMO1-202ENST00000428101 NLRP9Q7RTR0 991 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 TRIM73Q86UV7 250 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 THAP4Q8WY91 577 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 PEX13Q92968 403 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 CLIP3Q96DZ5 547 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 TTC1Q99614 292 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 ACTR5Q9H9F9 607 aaPredicted RBP26.34■■□□□ 1.81
LMO1-202ENST00000428101 FAM60AQ9NP50 221 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 CHRAC1Q9NRG0 131 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 SERTAD3Q9UJW9 196 aa26.34■■□□□ 1.81
LMO1-202ENST00000428101 TDRKHQ9Y2W6 561 aaKnown RBP26.34■■□□□ 1.81
LMO1-202ENST00000428101 TNRC6AQ8NDV7 1962 aaKnown RBP26.33■■□□□ 1.81
LMO1-202ENST00000428101 MAP3K7O43318 606 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 CAPN1P07384 714 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 CHRM5P08912 532 aaPredicted RBP26.33■■□□□ 1.81
LMO1-202ENST00000428101 RAB40ALP0C0E4 278 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 CYP2A7P20853 494 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 PRAMEP78395 509 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 ZIC1Q15915 447 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 FASTKD1Q53R41 847 aaKnown RBP26.33■■□□□ 1.81
LMO1-202ENST00000428101 COLEC12Q5KU26 742 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 ZNF662Q6ZS27 426 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 ENDOVQ8N8Q3 282 aaKnown RBP26.33■■□□□ 1.81
LMO1-202ENST00000428101 LKAAEAR1Q8TD35 194 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 LZTFL1Q9NQ48 299 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 OR6C2Q9NZP2 312 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 PLAGL1Q9UM63 463 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 CDYLQ9Y232 598 aa26.33■■□□□ 1.81
LMO1-202ENST00000428101 DRG1Q9Y295 367 aaKnown RBP26.33■■□□□ 1.81
LMO1-202ENST00000428101 PDGFAP04085 211 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 CSE1LP55060 971 aaKnown RBP26.32■■□□□ 1.8
LMO1-202ENST00000428101 ITGA1P56199 1179 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 KLRB1Q12918 225 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 LDB1Q86U70 411 aaPredicted RBP26.32■■□□□ 1.8
LMO1-202ENST00000428101 VRK3Q8IV63 474 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 SYTL1Q8IYJ3 562 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 C19orf47Q8N9M1 422 aaKnown RBP26.32■■□□□ 1.8
LMO1-202ENST00000428101 PPHLN1Q8NEY8 458 aaKnown RBP26.32■■□□□ 1.8
LMO1-202ENST00000428101 ADAMTS17Q8TE56 1095 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 AP1M1Q9BXS5 423 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 NLNQ9BYT8 704 aa26.32■■□□□ 1.8
LMO1-202ENST00000428101 EIF2B3Q9NR50 452 aaKnown RBP26.32■■□□□ 1.8
LMO1-202ENST00000428101 COL12A1Q99715 3063 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 CCDC88CQ9P219 2028 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 IQCF5A8MTL0 148 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 E7EQ34 232 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 H3BMH7 237 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 ZNF749O43361 778 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 HCRTR1O43613 425 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 GABRA4P48169 554 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 PCID2Q5JVF3 399 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 FAM69BQ5VUD6 431 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 CPZQ66K79 652 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 FAM198BQ6UWH4 519 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 ASB18Q6ZVZ8 466 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 SLC22A15Q8IZD6 547 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 TCTN2Q96GX1 697 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 CARD6Q9BX69 1037 aa26.31■■□□□ 1.8
LMO1-202ENST00000428101 MARCH4Q9P2E8 410 aaPredicted RBP26.31■■□□□ 1.8
LMO1-202ENST00000428101 F8W8V4 182 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 GPC4O75487 556 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 PEBP1P30086 187 aaKnown RBP26.3■■□□□ 1.8
LMO1-202ENST00000428101 SESN2P58004 480 aaPredicted RBP26.3■■□□□ 1.8
LMO1-202ENST00000428101 CRADDP78560 199 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 FOXK1P85037 733 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 HSPA14Q0VDF9 509 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 IGFBP7Q16270 282 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 PTCHD3Q3KNS1 767 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 ZNF385CQ66K41 422 aaPredicted RBP26.3■■□□□ 1.8
LMO1-202ENST00000428101 HOOK3Q86VS8 718 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 CHRNA10Q9GZZ6 450 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 TREX1Q9NSU2 369 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 TCFL5Q9UL49 500 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 ZKSCAN5Q9Y2L8 839 aa26.3■■□□□ 1.8
LMO1-202ENST00000428101 FGGP02679 453 aa26.29■■□□□ 1.8
LMO1-202ENST00000428101 PPARGP37231 505 aaPredicted RBP26.29■■□□□ 1.8
LMO1-202ENST00000428101 CHAF1BQ13112 559 aa26.29■■□□□ 1.8
LMO1-202ENST00000428101 DNAJC21Q5F1R6 531 aaKnown RBP26.29■■□□□ 1.8
LMO1-202ENST00000428101 MENTQ9BUN1 341 aa26.29■■□□□ 1.8
LMO1-202ENST00000428101 CATSPERZQ9NTU4 200 aa26.29■■□□□ 1.8
LMO1-202ENST00000428101 SNX7Q9UNH6 387 aa26.29■■□□□ 1.8
LMO1-202ENST00000428101 A0A0J9YY10 115 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 ARGFXA6NJG6 315 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 CCDC175P0C221 793 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 AOAHP28039 575 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 KCNJ1P48048 391 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 BASP1P80723 227 aaKnown RBP26.28■■□□□ 1.8
LMO1-202ENST00000428101 KCTD19Q17RG1 926 aaPredicted RBP26.28■■□□□ 1.8
LMO1-202ENST00000428101 DEFB110Q30KQ9 67 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 AARS2Q5JTZ9 985 aaKnown RBP26.28■■□□□ 1.8
LMO1-202ENST00000428101 C4orf22Q6V702 233 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 KRT222Q8N1A0 295 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 ASZ1Q8WWH4 475 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 SLC7A5P2Q9GIP4 190 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 SPRTNQ9H040 489 aaPredicted RBP26.28■■□□□ 1.8
LMO1-202ENST00000428101 ING2Q9H160 280 aa26.28■■□□□ 1.8
LMO1-202ENST00000428101 PRMT5O14744 637 aaPredicted RBP26.27■■□□□ 1.8
LMO1-202ENST00000428101 CD3EAPO15446 510 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms