RNA–Protein interactions for RNA: ENST00000427408.1

SSUH2-206, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-206ENST00000427408 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.3
SSUH2-206ENST00000427408 CDH17Q12864 832 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 SEMA3AQ14563 771 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 KCTD19Q17RG1 926 aaPredicted RBP13.18□□□□□ -0.3
SSUH2-206ENST00000427408 TSTD2Q5T7W7 516 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 PPP1R21Q6ZMI0 780 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 LDB1Q86U70 411 aaPredicted RBP13.18□□□□□ -0.3
SSUH2-206ENST00000427408 FAM20CQ8IXL6 584 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 RNF10Q8N5U6 811 aaKnown RBP13.18□□□□□ -0.3
SSUH2-206ENST00000427408 LMNTD1Q8N9Z9 388 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 FLVCR1-AS1Q8TAF5 88 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 LKAAEAR1Q8TD35 194 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 MIB2Q96AX9 1013 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 NLNQ9BYT8 704 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 ING2Q9H160 280 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 SYTL2Q9HCH5 934 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 SERTAD3Q9UJW9 196 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 ZNF148Q9UQR1 794 aa13.18□□□□□ -0.3
SSUH2-206ENST00000427408 HEATR9A2RTY3 570 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 ERI2A8K979 691 aaKnown RBP13.17□□□□□ -0.3
SSUH2-206ENST00000427408 FTH1P02794 183 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 MSL3P1P0C860 447 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 PEBP1P30086 187 aaKnown RBP13.17□□□□□ -0.3
SSUH2-206ENST00000427408 CCR7P32248 378 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 FDFT1P37268 417 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 GABRA4P48169 554 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
SSUH2-206ENST00000427408 DEFB110Q30KQ9 67 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 ZNF385CQ66K41 422 aaPredicted RBP13.17□□□□□ -0.3
SSUH2-206ENST00000427408 VRK3Q8IV63 474 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 TMEM151BQ8IW70 566 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 TBC1D21Q8IYX1 336 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 ZBTB2Q8N680 514 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 C19orf47Q8N9M1 422 aaKnown RBP13.17□□□□□ -0.3
SSUH2-206ENST00000427408 OR6P1Q8NGX9 317 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 SLC25A23Q9BV35 468 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 MLXIPLQ9NP71 852 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 CASS4Q9NQ75 786 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 RAB6BQ9NRW1 208 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 CIDEBQ9UHD4 219 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 SNX7Q9UNH6 387 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 PIKFYVEQ9Y2I7 2098 aa13.17□□□□□ -0.3
SSUH2-206ENST00000427408 CLEC18AA5D8T8 446 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 IQCF5A8MTL0 148 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 E7EQ34 232 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 H3BMH7 237 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 MAP3K7O43318 606 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 OR56A5P0C7T3 313 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 CBSLP0DN79 551 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 ADRA1DP25100 572 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 CDC25BP30305 580 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 SHMT2P34897 504 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 RPL22P35268 128 aaKnown RBP13.16□□□□□ -0.3
SSUH2-206ENST00000427408 CBSP35520 551 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 PGDP52209 483 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 FOXL2P58012 376 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 ACVR1Q04771 509 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 NCF4Q15080 339 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 SIX1Q15475 284 aaPredicted RBP13.16□□□□□ -0.3
SSUH2-206ENST00000427408 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 SYTL3Q4VX76 610 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 SEL1L2Q5TEA6 688 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 C1orf189Q5VU69 101 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 AFTPHQ6ULP2 937 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 CLEC18BQ6UXF7 455 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
SSUH2-206ENST00000427408 CLEC18CQ8NCF0 446 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 OR4L1Q8NH43 312 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSUH2-206ENST00000427408 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 RANBP9Q96S59 729 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 ACSS2Q9NR19 701 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 OR6C2Q9NZP2 312 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 MARCH4Q9P2E8 410 aaPredicted RBP13.16□□□□□ -0.3
SSUH2-206ENST00000427408 RIMKLBQ9ULI2 386 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 TCAF1Q9Y4C2 921 aa13.16□□□□□ -0.3
SSUH2-206ENST00000427408 A6NL46 340 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 E7EVH7 732 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 QSOX1O00391 747 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 OR2B3O76000 313 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 TMEM63AO94886 807 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 GAS8O95995 478 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 APRTP07741 180 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 CD97P48960 835 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 SESN2P58004 480 aaPredicted RBP13.15□□□□□ -0.3
SSUH2-206ENST00000427408 CRADDP78560 199 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 ATP1A4Q13733 1029 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 RPS6KA1Q15418 735 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 LYPLAL1Q5VWZ2 237 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 HOOK3Q86VS8 718 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 KRT222Q8N1A0 295 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 DNAJC22Q8N4W6 341 aa13.15□□□□□ -0.3
SSUH2-206ENST00000427408 ZNF655Q8N720 491 aaPredicted RBP13.15□□□□□ -0.3
SSUH2-206ENST00000427408 CFAP61Q8NHU2 1237 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms