RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SIGLEC10Q96LC7 697 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 LHX9Q9NQ69 397 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 PADI1Q9ULC6 663 aa17.75■□□□□ 0.43
SMARCAL1-205ENST00000425815 ATRXP46100 2492 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 FAM237BA0A1B0GVD1 139 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 MAGEB16A2A368 324 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 PIPSLA2A3N6 862 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 F8W8V4 182 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 CHRM5P08912 532 aaPredicted RBP17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 FAM87AP0C7U9 286 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 UGT2B7P16662 529 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 FMO4P31512 558 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 SHMT2P34897 504 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 DLSTP36957 453 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 ZIC1Q15915 447 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 KYNUQ16719 465 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 RNASEH2BQ5TBB1 312 aaKnown RBP17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 ATP1A1-AS1Q5TC04 95 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 PAPD7Q5XG87 772 aaKnown RBP17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 MRNIPQ6NTE8 343 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 CYB5D1Q6P9G0 228 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 SPESP1Q6UW49 350 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 TRIM73Q86UV7 250 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 LRRC6Q86X45 466 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 CREG2Q8IUH2 290 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 KIAA1143Q96AT1 154 aaPredicted RBP17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 STAMBPL1Q96FJ0 436 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 RUFY1Q96T51 708 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 EFHD1Q9BUP0 239 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 DDX47Q9H0S4 455 aaKnown RBP17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 FAM60AQ9NP50 221 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 SOHLH2Q9NX45 425 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 OR6C2Q9NZP2 312 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 GALPQ9UBC7 116 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 GNPTGQ9UJJ9 305 aa17.74■□□□□ 0.43
SMARCAL1-205ENST00000425815 FANCGO15287 622 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 HCRTR1O43613 425 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 S1PR4O95977 384 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 APOA4P06727 396 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 F7P08709 466 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 MSL3P1P0C860 447 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 OAS2P29728 719 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 PTGIRP43119 386 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 ADARP55265 1226 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 EIF3BP55884 814 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 TMTC4Q5T4D3 741 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 NEPROQ6NW34 567 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 FAM199XQ6PEV8 388 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 CDHR3Q6ZTQ4 885 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 SDCCAG8Q86SQ7 713 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 CILP2Q8IUL8 1156 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 SPNS2Q8IVW8 549 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 LINC01555Q8NAE3 123 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 OR8K5Q8NH50 307 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 OR1L3Q8NH93 324 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 CFAP61Q8NHU2 1237 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 GRK7Q8WTQ7 553 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 CT55Q8WUE5 264 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 STARD8Q92502 1023 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 TCF12Q99081 682 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 TSSK1BQ9BXA7 367 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 XAB2Q9HCS7 855 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 LATS2Q9NRM7 1088 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 CIDEBQ9UHD4 219 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 CRYL1Q9Y2S2 319 aa17.73■□□□□ 0.43
SMARCAL1-205ENST00000425815 BSNQ9UPA5 3926 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 H3BMH7 237 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 SCRG1O75711 98 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 MT-ND3P03897 115 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 FURINP09958 794 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 CCNYL3P0C7X3 344 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 PRKAR1AP10644 381 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 TCP1P17987 556 aaKnown RBP17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 OGNP20774 298 aaKnown RBP17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 IVDP26440 423 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 PKLRP30613 574 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 GABRA4P48169 554 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 GNG11P61952 73 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 CDC20Q12834 499 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 DHX34Q14147 1143 aaKnown RBP17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 GBX1Q14549 363 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 CRTC2Q53ET0 693 aaPredicted RBP17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 PLEKHS1Q5SXH7 462 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 LCN10Q6JVE6 187 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 CASC4Q6P4E1 433 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 ZNF517Q6ZMY9 492 aaPredicted RBP17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 FAM20CQ8IXL6 584 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 SLCO2A1Q92959 643 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 IL17FQ96PD4 163 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 PANX3Q96QZ0 392 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 PCYOX1Q9UHG3 505 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 PCDHGA6Q9Y5G7 932 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 NFS1Q9Y697 457 aa17.72■□□□□ 0.43
SMARCAL1-205ENST00000425815 GOLGA6L10A0A0M3HER8 536 aa17.71■□□□□ 0.43
SMARCAL1-205ENST00000425815 TMEM150CB9EJG8 249 aa17.71■□□□□ 0.43
SMARCAL1-205ENST00000425815 NIPSNAP2O75323 286 aa17.71■□□□□ 0.43
SMARCAL1-205ENST00000425815 CTSBP07858 339 aa17.71■□□□□ 0.43
SMARCAL1-205ENST00000425815 TCN2P20062 427 aa17.71■□□□□ 0.43
SMARCAL1-205ENST00000425815 GPS2Q13227 327 aa17.71■□□□□ 0.43
SMARCAL1-205ENST00000425815 CCSMST1Q4G0I0 132 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms