RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 ASF1AQ9Y294 204 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 STK38LQ9Y2H1 464 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PCDHGA2Q9Y5H1 932 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 TDRD6O60522 2096 aaKnown RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 CHD8Q9HCK8 2581 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 EPG5Q9HCE0 2579 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 ZFC3H1O60293 1989 aaKnown RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 A8MT66 165 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 SLCO1B7G3V0H7 640 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 TGDSO95455 350 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 HSPA4LO95757 839 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 MLYCDO95822 493 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 GUCA1CO95843 209 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 RPL10P27635 214 aaKnown RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 CSNK1EP49674 416 aaKnown RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 NXPH1P58417 271 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 BST1Q10588 318 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 SIM2Q14190 667 aaPredicted RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 ARHGAP19Q14CB8 494 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 SETDB1Q15047 1291 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 PCBP2Q15366 365 aaKnown RBP eCLIP10.07□□□□□ -0.8
MDC1-205ENST00000425072 ANGPT1Q15389 498 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 PPP1R3AQ16821 1122 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 ZNF678Q5SXM1 525 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 TAF8Q7Z7C8 310 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 GKN2Q86XP6 184 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 SYT12Q8IV01 421 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 PHACTR4Q8IZ21 702 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 AFAP1L2Q8N4X5 818 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 LILRA3Q8N6C8 439 aaPredicted RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 PTGR2Q8N8N7 351 aaPredicted RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 AVL9Q8NBF6 648 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 ZBTB44Q8NCP5 570 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 OR9A1PQ8NGU1 263 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 OR5K2Q8NHB8 316 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 SETD7Q8WTS6 366 aaKnown RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 EXT2Q93063 718 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 RHBDF1Q96CC6 855 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 FBXL8Q96CD0 374 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 C7orf26Q96N11 449 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 ZNF317Q96PQ6 595 aaPredicted RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 MECRQ9BV79 373 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 CD244Q9BZW8 370 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 KCNH6Q9H252 994 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 PFDN4Q9NQP4 134 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 TSR3Q9UJK0 312 aaKnown RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 PILRBQ9UKJ0 227 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 IKZF3Q9UKT9 509 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 PSMD13Q9UNM6 376 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 DOLKQ9UPQ8 538 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 KCNK6Q9Y257 313 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 ANGPTL3Q9Y5C1 460 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 PCYT1BQ9Y5K3 369 aaPredicted RBP10.07□□□□□ -0.8
MDC1-205ENST00000425072 KNL1Q8NG31 2342 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 SPAG17Q6Q759 2223 aa10.07□□□□□ -0.8
MDC1-205ENST00000425072 TPRP12270 2363 aaKnown RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 KIR2DS5A0A0G2JLQ3 304 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 A0A0G2JNG1 304 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 NEMP2A6NFY4 417 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 NCF1BA6NI72 391 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 PRR19A6NJB7 356 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 NCF1CA8MVU1 366 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 PRR33A8MZF0 331 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 KIR2DS3K7RE56 304 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 SNNO75324 88 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 KATNA1O75449 491 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 STK16O75716 305 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 WNT1P04628 370 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 F3P13726 295 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 NCF1P14598 390 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 NME1P15531 152 aaKnown RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 EPB42P16452 691 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 XRCC1P18887 633 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 ITPKAP23677 461 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 CCND1P24385 295 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 ACTR1BP42025 376 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 ARRB1P49407 418 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 HK2P52789 917 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 ACTR1AP61163 376 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PRKAA1Q13131 559 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 RCN2Q14257 317 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 KIR2DS5Q14953 304 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PHKG1Q16816 387 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 DUOXA1Q1HG43 343 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 UNC50Q53HI1 259 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PRRT3Q5FWE3 981 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 TPRG1LQ5T0D9 272 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 IYDQ6PHW0 289 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 IL27RAQ6UWB1 636 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 WDR75Q8IWA0 830 aaKnown RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 DCUN1D3Q8IWE4 304 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 LRRC34Q8IZ02 419 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 CHCHD4Q8N4Q1 142 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PIGKQ92643 395 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 DLG3Q92796 817 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 ATP6V1E2Q96A05 226 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 CXorf40BQ96DE9 158 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PDXPQ96GD0 296 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms