RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 LRRC6Q86X45 466 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 LMNTD1Q8N9Z9 388 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 ASZ1Q8WWH4 475 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 ZNF669Q96BR6 464 aaPredicted RBP17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 OR2A14Q96R47 310 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 TUBB2BQ9BVA1 445 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 TSSK1BQ9BXA7 367 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 KLHL25Q9H0H3 589 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 GALPQ9UBC7 116 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 PCYOX1Q9UHG3 505 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 POLG2Q9UHN1 485 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 LNPEPQ9UIQ6 1025 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 MRPS18BQ9Y676 258 aaKnown RBP17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 RPS6KL1Q9Y6S9 549 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 COL6A6A6NMZ7 2263 aa17.27■□□□□ 0.35
SBDSP1-202ENST00000423945 BOD1L1Q8NFC6 3051 aa17.27■□□□□ 0.35
SBDSP1-202ENST00000423945 PIPSLA2A3N6 862 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 C2orf74A8MZ97 194 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 F8W8V4 182 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 NKX2-8O15522 239 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 NIPSNAP2O75323 286 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 APOA4P06727 396 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 CHRM5P08912 532 aaPredicted RBP17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 UGT2B7P16662 529 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 OGNP20774 298 aaKnown RBP17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 FMO4P31512 558 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 SHMT2P34897 504 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 ARL4DP49703 201 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 ABRQ12979 859 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 PTK6Q13882 451 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 DHX34Q14147 1143 aaKnown RBP17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 GBX1Q14549 363 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 PRAMEF17Q5VTA0 474 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 MRNIPQ6NTE8 343 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 NEPROQ6NW34 567 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 SPESP1Q6UW49 350 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 TRIM73Q86UV7 250 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 CILP2Q8IUL8 1156 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 SPNS2Q8IVW8 549 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 PPIL6Q8IXY8 311 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 OTUD6BQ8N6M0 293 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 LINC01555Q8NAE3 123 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 ZSCAN1Q8NBB4 408 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 SLC38A9Q8NBW4 561 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 CAPZA3Q96KX2 299 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 FCRL4Q96PJ5 515 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 TCF12Q99081 682 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 SOHLH2Q9NX45 425 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 CIDEBQ9UHD4 219 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 CROTQ9UKG9 612 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 NFS1Q9Y697 457 aa17.26■□□□□ 0.35
SBDSP1-202ENST00000423945 FER1L5A0AVI2 2057 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 EIF4E1BA6NMX2 242 aaKnown RBP17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 DNALI1O14645 258 aaPredicted RBP17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 HCRTR1O43613 425 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 S1PR4O95977 384 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 NTRK1P04629 796 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 ITGB2P05107 769 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 PKLRP30613 574 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 ADARP55265 1226 aaKnown RBP17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 PPP1R7Q15435 360 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 ZIC1Q15915 447 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 KYNUQ16719 465 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 SDCCAG8Q86SQ7 713 aaPredicted RBP17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 BPHLQ86WA6 291 aaPredicted RBP17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 DENND6AQ8IWF6 608 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 ZNF843Q8N446 348 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 OR1L3Q8NH93 324 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 CFAP61Q8NHU2 1237 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 PANX3Q96QZ0 392 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 RUFY1Q96T51 708 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 NAPGQ99747 312 aaPredicted RBP17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 FAM60AQ9NP50 221 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 KCND1Q9NSA2 647 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 SAMD15Q9P1V8 674 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 RUVBL2Q9Y230 463 aaKnown RBP17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 CRYL1Q9Y2S2 319 aa17.25■□□□□ 0.35
SBDSP1-202ENST00000423945 MAGEB16A2A368 324 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 KRT87PA6NCN2 255 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 ZNF891A8MT65 544 aaPredicted RBP17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 BANF1O75531 89 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 USP1O94782 785 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 MSL3P1P0C860 447 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 DLSTP36957 453 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 GABRA4P48169 554 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 TMED2Q15363 201 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 CCSMST1Q4G0I0 132 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 PLEKHS1Q5SXH7 462 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 TMTC4Q5T4D3 741 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 RNF187Q5TA31 235 aaPredicted RBP17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 ATP1A1-AS1Q5TC04 95 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 UNC5DQ6UXZ4 953 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 CDHR3Q6ZTQ4 885 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 DCUN1D3Q8IWE4 304 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 CT55Q8WUE5 264 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 STARD8Q92502 1023 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 KIAA1143Q96AT1 154 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms