RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 RUFY1Q96T51 708 aa17.19■□□□□ 0.34
HDLBP-208ENST00000422080 AP1M1Q9BXS5 423 aa17.19■□□□□ 0.34
HDLBP-208ENST00000422080 CHST8Q9H2A9 424 aa17.19■□□□□ 0.34
HDLBP-208ENST00000422080 TREX1Q9NSU2 369 aa17.19■□□□□ 0.34
HDLBP-208ENST00000422080 CATSPERZQ9NTU4 200 aa17.19■□□□□ 0.34
HDLBP-208ENST00000422080 ANAPC2Q9UJX6 822 aa17.19■□□□□ 0.34
HDLBP-208ENST00000422080 TDRKHQ9Y2W6 561 aaKnown RBP17.19■□□□□ 0.34
HDLBP-208ENST00000422080 PYCARD-AS1I3L0S3 204 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 PRMT5O14744 637 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CD3EAPO15446 510 aaKnown RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 NRDCO43847 1150 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CEP104O60308 925 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 GPC4O75487 556 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CHRM5P08912 532 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 HBQ1P09105 142 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 PVRP15151 417 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 UGT2B7P16662 529 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CYP2A7P20853 494 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CCR7P32248 378 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 KCNJ1P48048 391 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 BASP1P80723 227 aaKnown RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CCZ1BP86790 482 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CCZ1P86791 482 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CDK16Q00536 496 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 LACTB2Q53H82 288 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CDHR3Q6ZTQ4 885 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 TMEM135Q86UB9 458 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 APLFQ8IW19 511 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 MPP5Q8N3R9 675 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 OR2A14Q96R47 310 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 ACTR5Q9H9F9 607 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-208ENST00000422080 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 MAN2B2Q9Y2E5 1009 aa17.18■□□□□ 0.34
HDLBP-208ENST00000422080 TENM4Q6N022 2769 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 E7EQ34 232 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 MKRN2OSH3BPM6 223 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 RFPL1O75677 317 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 SLCO2B1O94956 709 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 RPN2P04844 631 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 TPSB2P20231 275 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 ITGA1P56199 1179 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 HSPA14Q0VDF9 509 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 KIR2DS3Q14952 304 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 TPSAB1Q15661 275 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 KYNUQ16719 465 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 TCTN3Q6NUS6 607 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 LRRC8BQ6P9F7 803 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 LDB1Q86U70 411 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-208ENST00000422080 LRRC6Q86X45 466 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 C19orf47Q8N9M1 422 aaKnown RBP17.17■□□□□ 0.34
HDLBP-208ENST00000422080 FLVCR1-AS1Q8TAF5 88 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 CLIP3Q96DZ5 547 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 DPH2Q9BQC3 489 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-208ENST00000422080 KIFC1Q9BW19 673 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 NLNQ9BYT8 704 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 TRIM4Q9C037 500 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 KLHL25Q9H0H3 589 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 MRM3Q9HC36 420 aaKnown RBP17.17■□□□□ 0.34
HDLBP-208ENST00000422080 PCMTD2Q9NV79 361 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 SPHK1Q9NYA1 384 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 MARCH4Q9P2E8 410 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-208ENST00000422080 PPP2R2CQ9Y2T4 447 aa17.17■□□□□ 0.34
HDLBP-208ENST00000422080 IQCF5A8MTL0 148 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 APOA4P06727 396 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 AOAHP28039 575 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 CASRP41180 1078 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 RAB28P51157 221 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 CSE1LP55060 971 aaKnown RBP17.16■□□□□ 0.34
HDLBP-208ENST00000422080 RPS18P62269 152 aaKnown RBP17.16■□□□□ 0.34
HDLBP-208ENST00000422080 CRADDP78560 199 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 TLE1Q04724 770 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 SLC5A12Q1EHB4 618 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 ARMC3Q5W041 872 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 LCN10Q6JVE6 187 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 VRK3Q8IV63 474 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 GPR135Q8IZ08 494 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 PRELID2Q8N945 189 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 FAM60AQ9NP50 221 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 TLK1Q9UKI8 766 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 AP1M2Q9Y6Q5 423 aa17.16■□□□□ 0.34
HDLBP-208ENST00000422080 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-208ENST00000422080 A0A0J9YY10 115 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 KPNA5O15131 536 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 ZNF749O43361 778 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 NDUFS3O75489 264 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 CAPN1P07384 714 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 RPS3P23396 243 aaKnown RBP eCLIP17.15■□□□□ 0.34
HDLBP-208ENST00000422080 NMBRP28336 390 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 CXCR5P32302 372 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 TMED2Q15363 201 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 ZIC1Q15915 447 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 PTRHD1Q6GMV3 140 aaKnown RBP17.15■□□□□ 0.34
HDLBP-208ENST00000422080 UNC5DQ6UXZ4 953 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 TRIM73Q86UV7 250 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 DCUN1D3Q8IWE4 304 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 SYTL1Q8IYJ3 562 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 ENDOVQ8N8Q3 282 aaKnown RBP17.15■□□□□ 0.34
HDLBP-208ENST00000422080 LKAAEAR1Q8TD35 194 aa17.15■□□□□ 0.34
HDLBP-208ENST00000422080 N4BP2L2Q92802 583 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-208ENST00000422080 PANX3Q96QZ0 392 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms