RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PAEPP09466 180 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 DAOP14920 347 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 TMEM11P17152 192 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CCNE1P24864 410 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 BDKRB2P30411 391 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MAPK4P31152 587 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 KIF5BP33176 963 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MDH1P40925 334 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 PRPHP41219 470 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CASP2P42575 452 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 PRCPP42785 496 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MTIF2P46199 727 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 CLCN3P51790 818 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CLCNKAP51800 687 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CLNS1AP54105 237 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 STX17P56962 302 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 SEC61BP60468 96 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 CSNK2A1P68400 391 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 TFAP4Q01664 338 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 DLG1Q12959 904 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 GRIK2Q13002 908 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 HNRNPA0Q13151 305 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 SNTA1Q13424 505 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 RIPK1Q13546 671 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 TNFAIP1Q13829 316 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 KEAP1Q14145 624 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 NAB2Q15742 525 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ADIPOQQ15848 244 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 IZUMO4Q1ZYL8 232 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CCDC96Q2M329 555 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 KIF19Q2TAC6 998 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 SETMARQ53H47 684 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 TTMPQ5BVD1 217 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 SPECC1Q5M775 1068 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 AGBL2Q5U5Z8 902 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 GKAP1Q5VSY0 366 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 ZNF324BQ6AW86 544 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 RGMBQ6NW40 437 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 DUS1LQ6P1R4 473 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 WDR59Q6PJI9 974 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 C6orf89Q6UWU4 347 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 KIF6Q6ZMV9 814 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MEPCEQ7L2J0 689 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 NLRP14Q86W24 1093 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 IQCA1Q86XH1 822 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 TICAM1Q8IUC6 712 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 FOXRED2Q8IWF2 684 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ADHFE1Q8IWW8 467 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 RNF168Q8IYW5 571 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 IQCKQ8N0W5 287 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CSGALNACT2Q8N6G5 542 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MAB21L3Q8N8X9 362 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ZNF114Q8NC26 417 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CSNK2A3Q8NEV1 391 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ZNF473Q8WTR7 871 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 TANKQ92844 425 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 P2RX5Q93086 422 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CENPTQ96BT3 561 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ORAI1Q96D31 301 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ADGRG7Q96K78 797 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CAPZA3Q96KX2 299 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 C3orf30Q96M34 536 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CCDC114Q96M63 670 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CMTM3Q96MX0 182 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ZIM3Q96PE6 472 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CHP1Q99653 195 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 BARD1Q99728 777 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 TREX2Q9BQ50 279 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 JPH2Q9BR39 696 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 TUBGCP2Q9BSJ2 902 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CCSER1Q9C0I3 900 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 NSRP1Q9H0G5 558 aaKnown RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 STMN4Q9H169 189 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 C6orf106Q9H6K1 298 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 LTB4R2Q9NPC1 389 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 TBC1D22BQ9NU19 505 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ACSS1Q9NUB1 689 aaPredicted RBP2.62□□□□□ -1.99
VPS41-206ENST00000418457 TAB2Q9NYJ8 693 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 SMARCAL1Q9NZC9 954 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ODF2LQ9ULJ1 636 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 KCNJ14Q9UNX9 436 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 CCDC88AQ3V6T2 1871 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MROH5Q6ZUA9 1318 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 PCDH11XQ9BZA7 1347 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 PCDH11YQ9BZA8 1340 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 ZNF532Q9HCE3 1301 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 MEGF6O75095 1541 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 KCPQ6ZWJ8 1503 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 PHLPP1O60346 1717 aa2.62□□□□□ -1.99
VPS41-206ENST00000418457 DCCP43146 1447 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 PVALEFA0A1B0GWK0 134 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 MACROD2A1Z1Q3 448 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 FRMD3A2A2Y4 597 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 A8MZ25 164 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 B4DLN1 442 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 PTGES3LE9PB15 166 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 M0QZ24 198 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 ACOT8O14734 319 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 SPINT2O43291 252 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 TRAPPC3O43617 180 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms