RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CHRNA6Q15825 494 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 RUNDC3AQ59EK9 446 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 NKAPQ8N5F7 415 aaKnown RBP12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 PIK3C3Q8NEB9 887 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 TRIB2Q92519 343 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 ZNF599Q96NL3 588 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 NDEL1Q9GZM8 345 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 LRTM1Q9HBL6 345 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 POU2F3Q9UKI9 436 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 DLGAP4Q9Y2H0 992 aa12.94□□□□□ -0.34
TNFRSF8-203ENST00000417814 BCKDKO14874 412 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ACOX3O15254 700 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 RAD51BO15315 384 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 CBFA2T3O75081 653 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 APOL3O95236 402 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 KLKB1P03952 638 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 CYP2C18P33260 490 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 RGS4P49798 205 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 TIAL1Q01085 375 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 RELAQ04206 551 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 IL10RBQ08334 325 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 CLLU1OSQ5K130 101 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 KANK2Q63ZY3 851 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 PRMT9Q6P2P2 845 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 CLECL1Q8IZS7 167 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 TBC1D15Q8TC07 691 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 CAPSLQ8WWF8 208 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 SCAMP4Q969E2 229 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ACDQ96AP0 544 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ADGRE3Q9BY15 652 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ZDHHC6Q9H6R6 413 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 PRKAB1Q9Y478 270 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 PCDHGA11Q9Y5H2 935 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 PCDHA9Q9Y5H5 950 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 C16orf96A6NNT2 1141 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 TNFRSF10BO14763 440 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ACSL4O60488 711 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 EPB42P16452 691 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 GANABQ14697 944 aaKnown RBP12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 NPTX1Q15818 432 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ATP6AP1Q15904 470 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ADNP2Q6IQ32 1131 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 ZDHHC21Q8IVQ6 265 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 POC5Q8NA72 575 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 PROX1Q92786 737 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 GTPBP3Q969Y2 492 aaKnown RBP12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 RNF38Q9H0F5 515 aa12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 TFB2MQ9H5Q4 396 aaKnown RBP12.93□□□□□ -0.34
TNFRSF8-203ENST00000417814 A0A0G2JN53 185 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 EVPLLA8MZ36 301 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 BCAS1O75363 584 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 SEC24AO95486 1093 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 GPIP06744 558 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 HIST1H2AGP0C0S8 130 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 FCGR1AP12314 374 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 HIST1H2ADP20671 130 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 MYF6P23409 242 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 IGFBP5P24593 272 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CDKN2CP42773 168 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CRATP43155 626 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 STARD3Q14849 445 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 FAM214AQ32MH5 1076 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 LDLRAD1Q5T700 205 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 USP50Q70EL3 339 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 RTN4RL1Q86UN2 441 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 IGFN1Q86VF2 1251 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 UMODL1-AS1Q8N2C9 162 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CD200R1Q8TD46 325 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 IRGQQ8WZA9 623 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 BORCS5Q969J3 196 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 PGAP3Q96FM1 320 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 HIST1H2AHQ96KK5 128 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 SUSD3Q96L08 255 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 HIST1H2AJQ99878 128 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CHCHD6Q9BRQ6 235 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 H2AFJQ9BTM1 129 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CSNK1G1Q9HCP0 422 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 TBC1D30Q9Y2I9 924 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 SQORQ9Y6N5 450 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 LOC100130705A0A1B0GUX0 176 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 IFRD1O00458 451 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 UGT2B4P06133 528 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 NUDT7P0C024 238 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 ALDH3B2P48448 385 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 RPL34P49207 117 aaKnown RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 TTPAP49638 278 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 MXD1Q05195 221 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CTU2Q2VPK5 515 aaKnown RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CTSL3PQ5NE16 218 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 MEX3DQ86XN8 651 aaKnown RBP12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 SYT12Q8IV01 421 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 CROCCP3Q8IVE0 287 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 MINDY1Q8N5J2 469 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 HM13Q8TCT9 377 aa12.92□□□□□ -0.34
TNFRSF8-203ENST00000417814 SLC22A17Q8WUG5 538 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms