RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CD180Q99467 661 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 SLC30A3Q99726 388 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 RHOJQ9H4E5 214 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 SMYD2Q9NRG4 433 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 OR6C2Q9NZP2 312 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 LOXL2Q9Y4K0 774 aa22.43■■□□□ 1.18
SMARCB1-205ENST00000417137 RASSF9O75901 435 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 C1orf105O95561 183 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 MPOP05164 745 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 ANKRD34CP0C6C1 535 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 JMJD7P0C870 316 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 MCM3P25205 808 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 RBMS1P29558 406 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 GP5P40197 560 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 MLLT3P42568 568 aaPredicted RBP22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 CDKN2DP55273 166 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 GFERP55789 205 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 KBTBD12Q3ZCT8 623 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 FOXR1Q6PIV2 292 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 UNQ6494/PRO21346Q6UXR6 183 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 EIF1ADQ8N9N8 165 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 RCBTB1Q8NDN9 531 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 GIMAP7Q8NHV1 300 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 VPS39Q96JC1 886 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 CCDC86Q9H6F5 360 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 NINJ2Q9NZG7 142 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 CHD6Q8TD26 2715 aa22.42■■□□□ 1.18
SMARCB1-205ENST00000417137 CXorf49A8MYA2 514 aaPredicted RBP22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 CATP04040 527 aaKnown RBP22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 POLR2CP19387 275 aaPredicted RBP22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 SLC12A2P55011 1212 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 C16orf72Q14CZ0 275 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 GRTP1Q5TC63 336 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 CACHD1Q5VU97 1274 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 CPNE9Q8IYJ1 553 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 CARFQ8N187 725 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 PPM1NQ8N819 430 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 RAB11FIP5Q9BXF6 653 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 XKR8Q9H6D3 395 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 TSR3Q9UJK0 312 aaKnown RBP22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 SLC39A10Q9ULF5 831 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 ICKQ9UPZ9 632 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 NFS1Q9Y697 457 aa22.41■■□□□ 1.18
SMARCB1-205ENST00000417137 FAM95CA0A1B0GW59 222 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 GSAPA4D1B5 854 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 TMEM8BA6NDV4 472 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 C2orf74A8MZ97 194 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 PIAS1O75925 651 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 SLU7O95391 586 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 FDXRP22570 491 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 SPRP35270 261 aaPredicted RBP22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 RAB28P51157 221 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 IL2P60568 153 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 TIAL1Q01085 375 aaKnown RBP eCLIP22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 CYP4F3Q08477 520 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 PAQR3Q6TCH7 311 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 IGF2-ASQ6U949 168 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 FAM92BQ6ZTR7 304 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 PRSS42Q7Z5A4 293 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 UBXN4Q92575 508 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 CYTH2Q99418 400 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 TMEM121BQ9BXQ6 578 aaPredicted RBP22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 CDC42EP4Q9H3Q1 356 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 DKK4Q9UBT3 224 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 LNPEPQ9UIQ6 1025 aa22.4■■□□□ 1.18
SMARCB1-205ENST00000417137 PIPSLA2A3N6 862 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 TLCD2A6NGC4 264 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 BTN3A3O00478 584 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 BTN3A1O00481 513 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 ZBTB14O43829 449 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 PSIP1O75475 530 aaKnown RBP22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 DXOO77932 396 aaKnown RBP22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 TNFSF15O95150 251 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 SAT1P21673 171 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 MAP4P27816 1152 aaKnown RBP22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 POU4F1Q01851 419 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 CYHR1Q6ZMK1 362 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 ADGRF3Q8IZF5 1079 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 MYO1HQ8N1T3 1032 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 EEF1AKMT1Q8WVE0 214 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 ASB11Q8WXH4 323 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 TSPAN17Q96FV3 270 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 SLC46A1Q96NT5 459 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 RBBP8Q99708 897 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 MCMBPQ9BTE3 642 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 ZNF768Q9H5H4 540 aaKnown RBP22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 SYTL2Q9HCH5 934 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 PLAGL1Q9UM63 463 aa22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 RUVBL2Q9Y230 463 aaKnown RBP22.39■■□□□ 1.17
SMARCB1-205ENST00000417137 C1QTNF9BB2RNN3 333 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 AGRPO00253 132 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 C1QAP02745 245 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 C1QTNF9P0C862 333 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 TPBGLP0DKB5 382 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 PKLRP30613 574 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 BDKRB1P46663 353 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 ARL4DP49703 201 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 TMEM164Q5U3C3 297 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 KMT5CQ86Y97 462 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 SLC22A18Q96BI1 424 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms