RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 PYCR2Q96C36 320 aa13.39□□□□□ -0.27
SNHG17-202ENST00000414142 EPHX3Q9H6B9 360 aa13.39□□□□□ -0.27
SNHG17-202ENST00000414142 ZNHIT2Q9UHR6 403 aa13.39□□□□□ -0.27
SNHG17-202ENST00000414142 CROTQ9UKG9 612 aa13.39□□□□□ -0.27
SNHG17-202ENST00000414142 SLC5A10A0PJK1 596 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 KRT87PA6NCN2 255 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 A6NHS1 94 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 MID1O15344 667 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 RGS14O43566 566 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 SMNDC1O75940 238 aaKnown RBP eCLIP13.38□□□□□ -0.275e-10■■■■□ 25.2
SNHG17-202ENST00000414142 MSX2P35548 267 aaPredicted RBP13.38□□□□□ -0.27
SNHG17-202ENST00000414142 TIE1P35590 1138 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 KCNK10P57789 538 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 GRIK2Q13002 908 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 FLOT2Q14254 428 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 AP5B1Q2VPB7 878 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 PIP5KL1Q5T9C9 394 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.38□□□□□ -0.27
SNHG17-202ENST00000414142 CSGALNACT1Q8TDX6 532 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 MIEF2Q96C03 454 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 SLC45A3Q96JT2 553 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 FOPNLQ96NB1 174 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 NR1H4Q96RI1 486 aaPredicted RBP13.38□□□□□ -0.27
SNHG17-202ENST00000414142 KLHL4Q9C0H6 718 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 TRIM39Q9HCM9 518 aa13.38□□□□□ -0.27
SNHG17-202ENST00000414142 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
SNHG17-202ENST00000414142 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
SNHG17-202ENST00000414142 ARHGEF33A8MVX0 844 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 E7ENX8 843 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 ARNTLO00327 626 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SLC28A1O00337 649 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 MANBAO00462 879 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 CASQ2O14958 399 aaPredicted RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 LSM1O15116 133 aaKnown RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 PEX1O43933 1283 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 PSIP1O75475 530 aaKnown RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SLC22A3O75751 556 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 PCDH8O95206 1070 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 CATP04040 527 aaKnown RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SLC2A4P14672 509 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 XRCC1P18887 633 aaPredicted RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 TCN1P20061 433 aaPredicted RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 CAPN3P20807 821 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 ITPKAP23677 461 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 PDHA2P29803 388 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SLC6A12P48065 614 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 UFM1P61960 85 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 EMX2Q04743 252 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 CST6Q15828 149 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 CPSF6Q16630 551 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 IMPG1Q17R60 797 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 ZXDCQ2QGD7 858 aaPredicted RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 PDCD4Q53EL6 469 aaKnown RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 HACD2Q6Y1H2 254 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 RNF111Q6ZNA4 994 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 MTSS1LQ765P7 747 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 APLFQ8IW19 511 aaPredicted RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 CFAP206Q8IYR0 622 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 ROPN1LQ96C74 230 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 FBXL8Q96CD0 374 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 MTFMTQ96DP5 389 aaKnown RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 ABHD8Q96I13 439 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 PPP3R2Q96LZ3 170 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 BRINP2Q9C0B6 783 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 VCXQ9H320 206 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 IL1RL2Q9HB29 575 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 ATXN10Q9UBB4 475 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 PSMD13Q9UNM6 376 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SLC22A14Q9Y267 594 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 TRPM6Q9BX84 2022 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 H3BM21 787 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 H3BNX3 289 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 TRIM38O00635 465 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 KRT6AP02538 564 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 KRT6BP04259 564 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 DRD3P35462 400 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 TNFRSF4P43489 277 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 KRT6CP48668 564 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 BCL7AQ4VC05 210 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 HABP4Q5JVS0 413 aaKnown RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 RETREG3Q86VR2 466 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 HDDC3Q8N4P3 179 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 AADATQ8N5Z0 425 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 FOXJ1Q92949 421 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SPDL1Q96EA4 605 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SLC29A3Q9BZD2 475 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 RSPH9Q9H1X1 276 aaPredicted RBP13.37□□□□□ -0.27
SNHG17-202ENST00000414142 SPAG4Q9NPE6 437 aa13.37□□□□□ -0.27
SNHG17-202ENST00000414142 TICRRQ7Z2Z1 1910 aa13.36□□□□□ -0.27
SNHG17-202ENST00000414142 MAGEA13PA6NCF6 341 aa13.36□□□□□ -0.27
SNHG17-202ENST00000414142 IGLON5A6NGN9 336 aa13.36□□□□□ -0.27
SNHG17-202ENST00000414142 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
SNHG17-202ENST00000414142 EPORP19235 508 aa13.36□□□□□ -0.27
SNHG17-202ENST00000414142 BDKRB1P46663 353 aa13.36□□□□□ -0.27
SNHG17-202ENST00000414142 MRPL19P49406 292 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms