RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TNFSF8P32971 234 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 SOX6P35712 828 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 C21orf58P58505 322 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 FOLH1Q04609 750 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 RUNX1T1Q06455 604 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 SCGB2A2Q13296 93 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 PDE7AQ13946 482 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 LPIN1Q14693 890 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 DCAF12L2Q5VW00 463 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 CENPPQ6IPU0 288 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 PLEKHA7Q6IQ23 1121 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 ARHGAP11AQ6P4F7 1023 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 ENPP7Q6UWV6 458 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 RASGEF1CQ8N431 466 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 MCPH1Q8NEM0 835 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 OR52K2Q8NGK3 314 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 BBS10Q8TAM1 723 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 TBC1D16Q8TBP0 767 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 BRSK1Q8TDC3 778 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 SGF29Q96ES7 293 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 ZNF577Q9BSK1 485 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 CCSER1Q9C0I3 900 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 B3GNT4Q9C0J1 378 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 WNT5BQ9H1J7 359 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 RAD21L1Q9H4I0 556 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 MVB12BQ9H7P6 319 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 RPF1Q9H9Y2 349 aaKnown RBP4.38□□□□□ -1.71
BRCA1-204ENST00000412061 TBC1D17Q9HA65 648 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 HINT3Q9NQE9 182 aaKnown RBP4.38□□□□□ -1.71
BRCA1-204ENST00000412061 FAM212BQ9NTI7 297 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-204ENST00000412061 TMOD3Q9NYL9 352 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 KCNN3Q9UGI6 736 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 PTBP2Q9UKA9 531 aaKnown RBP4.38□□□□□ -1.71
BRCA1-204ENST00000412061 PLEKHA6Q9Y2H5 1048 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 A0A0G2JK05 382 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 DENND3A2RUS2 1198 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 ERICH4A6NGS2 130 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 KBTBD13C9JR72 458 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 H0YGN5 161 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 BOLA2-SMG1P6H3BVE0 249 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SOCS6O14544 535 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 HSPB6O14558 160 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 NDUFS4O43181 175 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SSX5O60225 188 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 TSPAN1O60635 241 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SCGB2A1O75556 95 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 RAB40ALP0C0E4 278 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 MYZAPP0CAP1 466 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SPP1P10451 314 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 UBA1P22314 1058 aaKnown RBP4.37□□□□□ -1.71
BRCA1-204ENST00000412061 ACP1P24666 158 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 GDI1P31150 447 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SLC6A6P31641 620 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 HTR6P50406 440 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 ASCL1P50553 236 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SRP54P61011 504 aaKnown RBP4.37□□□□□ -1.71
BRCA1-204ENST00000412061 CCNA1P78396 465 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 CHIT1Q13231 466 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 MEP1AQ16819 746 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 EPC2Q52LR7 807 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 HERC4Q5GLZ8 1057 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-204ENST00000412061 NOTUMQ6P988 496 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 CYB5D1Q6P9G0 228 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 MACC1Q6ZN28 852 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 TAF8Q7Z7C8 310 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 AMZ2Q86W34 360 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 AQP12AQ8IXF9 295 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 HORMAD2Q8N7B1 307 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 OR1J2Q8NGS2 313 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 DDB2Q92466 427 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 ARHGAP45Q92619 1136 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 STAMBPL1Q96FJ0 436 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SPATA33Q96N06 139 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 DDX47Q9H0S4 455 aaKnown RBP4.37□□□□□ -1.71
BRCA1-204ENST00000412061 MAGIXQ9H6Y5 334 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 ACSS1Q9NUB1 689 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-204ENST00000412061 SLCO1C1Q9NYB5 712 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 CISD1Q9NZ45 108 aaKnown RBP4.37□□□□□ -1.71
BRCA1-204ENST00000412061 MSRB1Q9NZV6 116 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 STK26Q9P289 416 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 TSPAN16Q9UKR8 245 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 DNPEPQ9ULA0 475 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 EXOC6BQ9Y2D4 811 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 NFE2L3Q9Y4A8 694 aa4.37□□□□□ -1.71
BRCA1-204ENST00000412061 ZMYM2Q9UBW7 1377 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ASTN2O75129 1339 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-204ENST00000412061 FEZF1A0PJY2 475 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ANKUB1A6NFN9 424 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 C2orf81A6NN90 581 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 A6NNC1 897 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 M0QZ24 198 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ADAM10O14672 748 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 TEX28O15482 410 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 XRCC3O43542 346 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ATP9AO75110 1047 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CXCL14O95715 111 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CELA2AP08217 269 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 ANKRD34CP0C6C1 535 aa4.36□□□□□ -1.71
BRCA1-204ENST00000412061 CCDC159P0C7I6 412 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms