RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 OR5K3A6NET4 321 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 A8MU76 341 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 ARHGEF33A8MVX0 844 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 BTN3A3O00478 584 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 BTN3A1O00481 513 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 RPN2P04844 631 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 CBSLP0DN79 551 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 POLR2CP19387 275 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-206ENST00000412056 PKLRP30613 574 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 CBSP35520 551 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 SKIV2L2P42285 1042 aaKnown RBP13.54□□□□□ -0.24
CPNE1-206ENST00000412056 TAS2R39P59534 338 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 ZNF460Q14592 562 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 C16orf72Q14CZ0 275 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 C3orf38Q5JPI3 329 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 KLHL35Q6PF15 583 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 TMEM207Q6UWW9 146 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 FAM92BQ6ZTR7 304 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 AMIGO1Q86WK6 493 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 PLXDC1Q8IUK5 500 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 LMNTD1Q8N9Z9 388 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 EEF1AKMT1Q8WVE0 214 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 LINGO1Q96FE5 620 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 FOPNLQ96NB1 174 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 IL17FQ96PD4 163 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 GPR22Q99680 433 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 STRADBQ9C0K7 418 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 CAB39LQ9H9S4 337 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 PDP2Q9P2J9 529 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 SLC39A10Q9ULF5 831 aa13.54□□□□□ -0.24
CPNE1-206ENST00000412056 CCDC187A0A096LP49 1063 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 GSAPA4D1B5 854 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 EIF3FO00303 357 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 KIF1CO43896 1103 aaKnown RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 PSIP1O75475 530 aaKnown RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 TSPAN12O95859 305 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 ZNF37AP17032 561 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 SHMT2P34897 504 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 SPRP35270 261 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 RGS4P49798 205 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 PMS2P54278 862 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 VSNL1P62760 191 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 TRA2AQ13595 282 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 ARMC6Q6NXE6 501 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 TRMT10CQ7L0Y3 403 aaKnown RBP13.53□□□□□ -0.24
CPNE1-206ENST00000412056 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 CEP97Q8IW35 865 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 ADGRF3Q8IZF5 1079 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 GATA6Q92908 595 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 GRAMD1AQ96CP6 724 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 CYTH2Q99418 400 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 MENTQ9BUN1 341 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 RAB33BQ9H082 229 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 HRASLS2Q9NWW9 162 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 EPHA6Q9UF33 1036 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 SATB2Q9UPW6 733 aa13.53□□□□□ -0.24
CPNE1-206ENST00000412056 HEATR5BQ9P2D3 2071 aa13.52□□□□□ -0.24
CPNE1-206ENST00000412056 A0A087WUV0 522 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 TMX2-CTNND1H3BSU7 103 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 PHGDHO43175 533 aaKnown RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 RIPK2O43353 540 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 CATP04040 527 aaKnown RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 MPOP05164 745 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ITGA2BP08514 1039 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ABHD2P08910 425 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 HGFP14210 728 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 CCNFP41002 786 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 SLC12A2P55011 1212 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 TUBB4BP68371 445 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 GABREP78334 506 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 POU4F1Q01851 419 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ILF2Q12905 390 aaKnown RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 BMPR2Q13873 1038 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 USP10Q14694 798 aaKnown RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 UAP1Q16222 522 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ERCC6LQ2NKX8 1250 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 LRRC8EQ6NSJ5 796 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 TTC23LQ6PF05 361 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 FOXR1Q6PIV2 292 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 RAB11FIP2Q7L804 512 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ARHGAP22Q7Z5H3 698 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 MYO1HQ8N1T3 1032 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 WDR36Q8NI36 951 aaKnown RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ASB11Q8WXH4 323 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 UBXN4Q92575 508 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ZDHHC12Q96GR4 267 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 MAP3K3Q99759 626 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 TMEM121BQ9BXQ6 578 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-206ENST00000412056 NRSN2Q9GZP1 204 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 SPHK1Q9NYA1 384 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 ACTR10Q9NZ32 417 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms