RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SMARCAD1Q9H4L7 1026 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SP110Q9HB58 689 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SYBUQ9NX95 663 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 GDAP2Q9NXN4 497 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 GDE1Q9NZC3 331 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 PCDHGC3Q9UN70 934 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SLC6A5Q9Y345 797 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 TSC22D4Q9Y3Q8 395 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 PCDHB2Q9Y5E7 798 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 E9PQ18 207 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 TNFRSF10BO14763 440 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 KMOO15229 486 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 LZTS3O60299 673 aaPredicted RBP3.06□□□□□ -1.92
RGPD3-202ENST00000409886 CHEK2O96017 543 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SMIM10L2AP0DMW4 78 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SMIM10L2BP0DMW5 78 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 TGFB3P10600 412 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 AGTR2P50052 363 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 NUDT6P53370 316 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 CASP9P55211 416 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 ZXDBP98169 803 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 POU5F1BQ06416 359 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 TRIM25Q14258 630 aaKnown RBP3.06□□□□□ -1.92
RGPD3-202ENST00000409886 P2RY14Q15391 338 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 TUSC1Q2TAM9 212 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 TOR1AIP1Q5JTV8 583 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 KDELC1Q6UW63 502 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 ENPP6Q6UWR7 440 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 C4orf22Q6V702 233 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 LARP4Q71RC2 724 aaKnown RBP eCLIP3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SLC26A11Q86WA9 606 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SLFN12Q8IYM2 578 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 DEFB124Q8NES8 71 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 SPPL2BQ8TCT7 592 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 USP7Q93009 1102 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 IFT74Q96LB3 600 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 CDK15Q96Q40 435 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 EBNA1BP2Q99848 306 aaKnown RBP3.06□□□□□ -1.92
RGPD3-202ENST00000409886 DPH1Q9BZG8 443 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 DUSP15Q9H1R2 295 aaPredicted RBP3.06□□□□□ -1.92
RGPD3-202ENST00000409886 RNF39Q9H2S5 420 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 C6orf50Q9HD87 102 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 CHST12Q9NRB3 414 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 STARD5Q9NSY2 213 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 C20orf96Q9NUD7 363 aaPredicted RBP3.06□□□□□ -1.92
RGPD3-202ENST00000409886 MTRF1LQ9UGC7 380 aaKnown RBP3.06□□□□□ -1.92
RGPD3-202ENST00000409886 HIVEP1P15822 2718 aa3.06□□□□□ -1.92
RGPD3-202ENST00000409886 EML6Q6ZMW3 1958 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 COL1A2P08123 1366 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TCRBV16S1A1N1A0A5B0 115 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SPECC1L-ADORA2AF8WAN1 911 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 FFAR3O14843 346 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 INPPL1O15357 1258 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MFSD11O43934 449 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 E2F6O75461 281 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DDHD2O94830 711 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ZWINTO95229 277 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MPC2O95563 127 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CPNE6O95741 557 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 LALBAP00709 142 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MT-ND3P03897 115 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ALPLP05186 524 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 NUDT7P0C024 238 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TXNP10599 105 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 SRCP12931 536 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 KRT5P13647 590 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 AZGP1P25311 298 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PSMB4P28070 264 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MAGEA12P43365 314 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PIK3CGP48736 1102 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 HCAR3P49019 387 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 NR1H2P55055 460 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ABCE1P61221 599 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MERTKQ12866 999 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 FOXD4Q12950 439 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 KRT81Q14533 505 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MORF4L2Q15014 288 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 RFTN2Q52LD8 501 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 PMS2CLQ68D20 193 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GRAMD4Q6IC98 578 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 FAM171BQ6P995 826 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GPRIN1Q7Z2K8 1008 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM135Q86UB9 458 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 XYLT1Q86Y38 959 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 DMRTC2Q8IXT2 367 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TCAIMQ8N3R3 496 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CAPSLQ8WWF8 208 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 EDARADDQ8WWZ3 215 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 COPS5Q92905 334 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ISG20Q96AZ6 181 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 RUNDC3BQ96NL0 473 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CASD1Q96PB1 797 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 MBOAT4Q96T53 435 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 NUSAP1Q9BXS6 441 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 FAM117AQ9C073 453 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 OR51E2Q9H255 320 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 GPATCH2Q9NW75 528 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CUEDC1Q9NWM3 386 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ADPRHL2Q9NX46 363 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 OBP2AQ9NY56 170 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms