RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 CAB39LQ9H9S4 337 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 STRCP1A6NGW2 1772 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 NDST3O95803 873 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 BMP4P12644 408 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TOB1P50616 345 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PRKAG1P54619 331 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 HHEXQ03014 270 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF155Q12901 538 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 RSPO4Q2I0M5 234 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PARP6Q2NL67 630 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TBRG1Q3YBR2 411 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF470Q6ECI4 717 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PLET1Q6UQ28 207 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 UBE2R2Q712K3 238 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 NPAS3Q8IXF0 933 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 NKAPQ8N5F7 415 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ZCCHC14Q8WYQ9 949 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SYN2Q92777 582 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SGF29Q96ES7 293 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TUBGCP5Q96RT8 1024 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 MYADMQ96S97 322 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TAPBPLQ9BX59 468 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 DEFB126Q9BYW3 111 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PREBQ9HCU5 417 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ACAD8Q9UKU7 415 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TMEM5Q9Y2B1 443 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TMEM98Q9Y2Y6 226 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 IGLON5A6NGN9 336 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ABCB7O75027 752 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 USP12O75317 370 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 LEFTY1O75610 366 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 OAZ2O95190 189 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 IL33O95760 270 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 IFNA7P01567 189 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 STOMP27105 288 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 RXRGP48443 463 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PPP3CAQ08209 521 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 DSG2Q14126 1118 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PCID2Q5JVF3 399 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SHKBP1Q8TBC3 707 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 STARD8Q92502 1023 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 AKAP1Q92667 903 aaKnown RBP eCLIP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ERMAPQ96PL5 475 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 GDF15Q99988 308 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 BPIFA3Q9BQP9 254 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ULBP3Q9BZM4 244 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 KCNH6Q9H252 994 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 LINC00597Q9H2U6 94 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 BLOC1S4Q9NUP1 217 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 MIOSQ9NXC5 875 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 CYTH4Q9UIA0 394 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 FBXO4Q9UKT5 387 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 A0A087X0T9 212 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TTC34A8MYJ7 566 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PSMD11O00231 422 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 WWP2O00308 870 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 OR2B3O76000 313 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 VAPBO95292 243 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 BMP1P13497 986 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SOX11P35716 441 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 HK2P52789 917 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ACSM2AQ08AH3 577 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 RBBP4Q09028 425 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 OVGP1Q12889 678 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 LAPTM5Q13571 262 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 C6orf183Q5T699 404 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ACSM2BQ68CK6 577 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PDPK2PQ6A1A2 396 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 UTS2BQ765I0 119 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 EXOC3L1Q86VI1 746 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TC2NQ8N9U0 490 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 FAXDC2Q96IV6 333 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SERPINB12Q96P63 405 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 THUMPD3Q9BV44 507 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ADI1Q9BV57 179 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 METTL7AQ9H8H3 244 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 NEK6Q9HC98 313 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 DNAAF2Q9NVR5 837 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TBC1D24Q9ULP9 559 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 FAM234BA2RU67 622 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 HAS3O00219 553 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 TP53I11O14683 189 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 OR1F1O43749 312 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 ZNF432O94892 652 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 UBOX5O94941 541 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PIGNO95427 931 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 SERPINA1P01009 418 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 RPLP0P05388 317 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 CD27P26842 260 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 RHEBQ15382 184 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 CHI3L2Q15782 390 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 GALNTL6Q49A17 601 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 PSTKQ8IV42 348 aaKnown RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 FAM13CQ8NE31 585 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 MDGA1Q8NFP4 955 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 CMASQ8NFW8 434 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 OR5J2Q8NH18 312 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 OSER1Q9NX31 292 aa7.17□□□□□ -1.26
SCN9A-202ENST00000409435 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.17□□□□□ -1.26
SCN9A-202ENST00000409435 NEU2Q9Y3R4 380 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms