RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 WDR73Q6P4I2 378 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 DZIP1Q86YF9 867 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 SPATA2LQ8IUW3 424 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 CNTN4Q8IWV2 1026 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZNF34Q8IZ26 560 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 C1orf52Q8N6N3 182 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 ELP5Q8TE02 316 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 NEUROG1Q92886 237 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 SNRNP40Q96DI7 357 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 QRFPRQ96P65 431 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 MTERF1Q99551 399 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 LMF2Q9BU23 707 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 FNDC11Q9BVV2 318 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLC5A7Q9GZV3 580 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 SEMA6AQ9H2E6 1030 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 MINDY3Q9H8M7 445 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 Q9N2K0 584 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 CD93Q9NPY3 652 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 TBC1D7Q9P0N9 293 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 KLHL9Q9P2J3 617 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 MOSPD1Q9UJG1 213 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 CPSF3Q9UKF6 684 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 MYO6Q9UM54 1294 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 A0A0U1RQJ8 604 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 hDV102S1A0JD36 115 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 OR6C75A6NL08 312 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 MEIS2O14770 477 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 ST8SIA3O43173 380 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 ACSL3O95573 720 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLC16A8O95907 504 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 IGHV2-70P01814 119 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 UROSP10746 265 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 ITIH1P19827 911 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 S1PR1P21453 382 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 HOXD3P31249 432 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 SOAT1P35610 550 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 FRKP42685 505 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 STARD6P59095 220 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 KIAA1024LP59773 190 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 DLK1P80370 383 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 RPS6KA1Q15418 735 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 OASLQ15646 514 aaKnown RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZNF585BQ52M93 769 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 LBHQ53QV2 105 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 MFSD12Q6NUT3 480 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 RGMBQ6NW40 437 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 C8orf82Q6P1X6 216 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 TMPRSS11BQ86T26 416 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 ADHFE1Q8IWW8 467 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 ANKRD13CQ8N6S4 541 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 OR52I2Q8NH67 350 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 CENPTQ96BT3 561 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 THOC3Q96J01 351 aaKnown RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 TXNDC15Q96J42 360 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 CTAGE1Q96RT6 745 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 HNRNPABQ99729 332 aaKnown RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLC25A33Q9BSK2 321 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 APPL1Q9UKG1 709 aa4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 ISY1Q9ULR0 285 aaKnown RBP4.69□□□□□ -1.66
HMGB1P13-201ENST00000406019 A0A1W2PPK0 400 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SDR42E2A6NKP2 422 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 PGRMC2O15173 223 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 EIF3DO15371 548 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 FCGR3BO75015 233 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 LDLRP01130 860 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 IGHV4-30-4P0DP06 118 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SAGP10523 405 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 CALRP27797 417 aaKnown RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 CORO1AP31146 461 aaKnown RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 MAPK12P53778 367 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 BRWD1-AS2P59051 145 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 MAT1AQ00266 395 aaKnown RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 NPRL3Q12980 569 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 TRAF3Q13114 568 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 CBX3Q13185 183 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 KEAP1Q14145 624 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLC39A14Q15043 492 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 TAZQ16635 292 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 HFEQ30201 348 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 FUT11Q495W5 492 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SPOUT1Q5T280 376 aaKnown RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZNF324BQ6AW86 544 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 ENPP7Q6UWV6 458 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 LINGO4Q6UY18 593 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 KCTD9Q7L273 389 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SIAH3Q8IW03 269 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 MAP7D3Q8IWC1 876 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 C4orf19Q8IY42 314 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 CLYBLQ8N0X4 340 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SFRP1Q8N474 314 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 OR5M8Q8NGP6 311 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 BCL2L2Q92843 193 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 FAM84BQ96KN1 310 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 TMEM237Q96Q45 408 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLX1AQ9BQ83 275 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 NTPCRQ9BSD7 190 aaKnown RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 THAP9Q9H5L6 903 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 CDH20Q9HBT6 801 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 DNAJC4Q9NNZ3 241 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 ODF2LQ9ULJ1 636 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms