RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FOPNLQ96NB1 174 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 RTKNQ9BST9 563 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 TRIT1Q9H3H1 467 aaKnown RBP15.5■□□□□ 0.07
HMGA1-204ENST00000401473 NCKIPSDQ9NZQ3 722 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 PLAGL1Q9UM63 463 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 PDE10AQ9Y233 779 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 TDRKHQ9Y2W6 561 aaKnown RBP15.5■□□□□ 0.07
HMGA1-204ENST00000401473 SPAARA0A1B0GVQ0 90 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 RHPN2P1A8MT19 583 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 BTN3A1O00481 513 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 TNFSF14O43557 240 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 PYGBP11216 843 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 KRT15P19012 456 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 ALDH4A1P30038 563 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 SLC26A3P40879 764 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 OR1D5P58170 312 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 NR1D2Q14995 579 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 TSNQ15631 228 aaKnown RBP15.5■□□□□ 0.07
HMGA1-204ENST00000401473 LRRC8EQ6NSJ5 796 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 UBE2R2Q712K3 238 aaPredicted RBP15.5■□□□□ 0.07
HMGA1-204ENST00000401473 EFL1Q7Z2Z2 1120 aaKnown RBP15.5■□□□□ 0.07
HMGA1-204ENST00000401473 TBC1D1Q86TI0 1168 aaPredicted RBP15.5■□□□□ 0.07
HMGA1-204ENST00000401473 RIBC1Q8N443 379 aaPredicted RBP15.5■□□□□ 0.07
HMGA1-204ENST00000401473 OR52E1Q8NGJ3 308 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 IFI44Q8TCB0 444 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 ZFPM2Q8WW38 1151 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 ANKRD7Q92527 254 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 CDC6Q99741 560 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 SLC12A9Q9BXP2 914 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 KLHL2O95198 593 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 KCNK5O95279 499 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 MT-ND3P03897 115 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 MPOP05164 745 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 LTA4HP09960 611 aaKnown RBP15.49■□□□□ 0.07
HMGA1-204ENST00000401473 CEACAM1P13688 526 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 PNLIPP16233 465 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 NDUFS1P28331 727 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 ACADVLP49748 655 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 NOVA1P51513 510 aaKnown RBP15.49■□□□□ 0.07
HMGA1-204ENST00000401473 BIRC2Q13490 618 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 PPP1R3AQ16821 1122 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 GLRX5Q86SX6 157 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 CLEC14AQ86T13 490 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 Q8N9G6 341 aaPredicted RBP15.49■□□□□ 0.07
HMGA1-204ENST00000401473 OR4E2Q8NGC2 313 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 OR6C4Q8NGE1 309 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 SLC38A3Q99624 504 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 XKR8Q9H6D3 395 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 ZNF446Q9NWS9 450 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 CACNA1AO00555 2505 aa15.49■□□□□ 0.07
HMGA1-204ENST00000401473 A0A087X1B8 175 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 NPEPPSL1A6NEC2 478 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 SASH3O75995 380 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 CREB1P16220 341 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 KRT4P19013 534 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 GPR3P46089 330 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 GLRBP48167 497 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 DUSP3P51452 185 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 OR4D1Q15615 310 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 ZXDCQ2QGD7 858 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 TAF1BQ53T94 588 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 TNFAIP8L3Q5GJ75 292 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 NKAIN2Q5VXU1 208 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 MBOAT1Q6ZNC8 495 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 HDXQ7Z353 690 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 CCDC91Q7Z6B0 441 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 SLCO6A1Q86UG4 719 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 TRABD2AQ86V40 505 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 DCUN1D3Q8IWE4 304 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 RBM12BQ8IXT5 1001 aaKnown RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 DENND1AQ8TEH3 1009 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 IL17FQ96PD4 163 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 CCDC3Q9BQI4 270 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 SLC32A1Q9H598 525 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 UCK1Q9HA47 277 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 PARVBQ9HBI1 364 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 PCMTD2Q9NV79 361 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 UTP6Q9NYH9 597 aaKnown RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 OGFRQ9NZT2 677 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 POLG2Q9UHN1 485 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 FREM2Q5SZK8 3169 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 CELSR3Q9NYQ7 3312 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 A0A1W2PQM1 296 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 CATP04040 527 aaKnown RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 C8GP07360 202 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 TYRP1P17643 537 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 SDHBP21912 280 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 SIM1P81133 766 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 CFHR1Q03591 330 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 CDHR3Q6ZTQ4 885 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 SPRED1Q7Z699 444 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 TMEM151AQ8N4L1 468 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 FBXO15Q8NCQ5 510 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 NAT6Q93015 286 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 KIAA1191Q96A73 305 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 RAD51AP1Q96B01 352 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 SH3KBP1Q96B97 665 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 PKP4Q99569 1192 aa15.48■□□□□ 0.07
HMGA1-204ENST00000401473 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-204ENST00000401473 TFB2MQ9H5Q4 396 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms