RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 LINC00597Q9H2U6 94 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RNF11Q9Y3C5 154 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SLC4A7Q9Y6M7 1214 aa17.32■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PLXNB3Q9ULL4 1909 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 H0Y858 1186 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HOXC11O43248 304 aaPredicted RBP17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SEC22BO75396 215 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 LEFTY1O75610 366 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GSTM1P09488 218 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SYN1P17600 705 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GDF5P43026 501 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RPL5P46777 297 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RPL38P63173 70 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GSTM4Q03013 218 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PRKCQQ04759 706 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HSPA14Q0VDF9 509 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 LIPJQ5W064 366 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 KLHDC8AQ8IYD2 350 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RGL4Q8IZJ4 473 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 OSCP1Q8WVF1 389 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 BTN2A2Q8WVV5 523 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HERVK_113Q902F9 699 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CMTM7Q96FZ5 175 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TSC22D3Q99576 134 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MRPS26Q9BYN8 205 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CLMPQ9H6B4 373 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 DNAJC11Q9NVH1 559 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TMPRSS11EQ9UL52 423 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MAPRE3Q9UPY8 281 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 POLR3HQ9Y535 204 aaPredicted RBP17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PIKFYVEQ9Y2I7 2098 aa17.31■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TCRBV5S2A0A599 114 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ERN1O75460 977 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RFPL2O75678 378 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ADH1CP00326 375 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CLDN8P56748 225 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ST8SIA6P61647 398 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MAPKAPK3Q16644 382 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CYP51A1Q16850 503 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RABL3Q5HYI8 236 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TMEM240Q5SV17 173 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HMBOX1Q6NT76 420 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TECPR1Q7Z6L1 1165 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 DCBLD1Q8N8Z6 715 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MTIF3Q9H2K0 278 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ELOVL6Q9H5J4 265 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GORASP2Q9H8Y8 452 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PCDH12Q9NPG4 1184 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 EGFL7Q9UHF1 273 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SUFUQ9UMX1 484 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 AURKCQ9UQB9 309 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PER2O15055 1255 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PRMT3O60678 531 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TIPRLO75663 272 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PRNPP04156 253 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 DGKGP49619 791 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CCT8P50990 548 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SLC5A9Q2M3M2 681 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ARSIQ5FYB1 569 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RNF220Q5VTB9 566 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TMEM215Q68D42 235 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SLC2A7Q6PXP3 512 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CYP2U1Q7Z449 544 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CHERPQ8IWX8 916 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GLMNQ92990 594 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 NSMCE2Q96MF7 247 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 BDH2Q9BUT1 245 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TMEM106CQ9BVX2 250 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ANKRD60Q9BZ19 345 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RMND5AQ9H871 391 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CD320Q9NPF0 282 aa17.3■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ANKRD12Q6UB98 2062 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 C9JVG2 144 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 INPP4BO15327 924 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CSPG5O95196 566 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PAPLNO95428 1278 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CLPTM1O96005 669 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PGRP06401 933 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 FESP07332 822 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CISD3P0C7P0 127 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CDH1P12830 882 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PAX7P23759 505 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MAP4P27816 1152 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CASP2P42575 452 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 DHCR24Q15392 516 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ATP6AP1Q15904 470 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 DPY19L1Q2PZI1 675 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 C10orf62Q5T681 223 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 FAM219BQ5XKK7 198 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ZNF765Q7L2R6 523 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HSD11B1LQ7Z5J1 315 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SPRED1Q7Z699 444 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 AMIGO2Q86SJ2 522 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CSGALNACT1Q8TDX6 532 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SELENOMQ8WWX9 145 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GTF2H4Q92759 462 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TESCQ96BS2 214 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CCDC138Q96M89 665 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HAUS8Q9BT25 410 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms