RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 ZBTB11O95625 1053 aaPredicted RBP16.18■□□□□ 0.18
APTR-201ENST00000398043 EBLN1P0CF75 366 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 PKMP14618 531 aaKnown RBP16.18■□□□□ 0.18
APTR-201ENST00000398043 SHMT2P34897 504 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 SLC1A2P43004 574 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 HSD11B2P80365 405 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 CTBP1Q13363 440 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 MAP7Q14244 749 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 CRYMQ14894 314 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 KYNUQ16719 465 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
APTR-201ENST00000398043 ARHGAP40Q5TG30 622 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 ARMC6Q6NXE6 501 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 PCSK4Q6UW60 755 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 CCDC81Q6ZN84 652 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 SIDT2Q8NBJ9 832 aaKnown RBP16.18■□□□□ 0.18
APTR-201ENST00000398043 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
APTR-201ENST00000398043 SPATA4Q8NEY3 305 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 BBC3Q96PG8 261 aaPredicted RBP16.18■□□□□ 0.18
APTR-201ENST00000398043 OR2A14Q96R47 310 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 KRT12Q99456 494 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 SPHK1Q9NYA1 384 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 ACTR10Q9NZ32 417 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 PCDHB11Q9Y5F2 797 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 TEX264Q9Y6I9 313 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 COL6A6A6NMZ7 2263 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 TEX51A0A1B0GUA7 166 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 SLC9B1P1A6NJY1 282 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 C2orf74A8MZ97 194 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 MATN4O95460 622 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 CHRM5P08912 532 aaPredicted RBP16.17■□□□□ 0.18
APTR-201ENST00000398043 MSL3P1P0C860 447 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 ST6GAL1P15907 406 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 ATP5DP30049 168 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 PEBP1P30086 187 aaKnown RBP16.17■□□□□ 0.18
APTR-201ENST00000398043 PKLRP30613 574 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 CASQ1P31415 396 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 CLCN7P51798 805 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 ITGA8P53708 1063 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 ABRQ12979 859 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 PRKAA1Q13131 559 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 TMED2Q15363 201 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 OTOAQ7RTW8 1153 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 CACNA2D3Q8IZS8 1091 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 LINC01555Q8NAE3 123 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 FCRL4Q96PJ5 515 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 TRAPPC9Q96Q05 1148 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 SLC30A3Q99726 388 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 FGF21Q9NSA1 209 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 C20orf96Q9NUD7 363 aaPredicted RBP16.17■□□□□ 0.18
APTR-201ENST00000398043 OR6C2Q9NZP2 312 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 FBXO5Q9UKT4 447 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 PLAGL1Q9UM63 463 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 VPS9D1Q9Y2B5 631 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 NFS1Q9Y697 457 aa16.17■□□□□ 0.18
APTR-201ENST00000398043 PIPSLA2A3N6 862 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 GSAPA4D1B5 854 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 PFDN6O15212 129 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 SPAG6O75602 509 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 TTC4O95801 387 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 UGT2B7P16662 529 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 RPL21P46778 160 aaKnown RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 ATP1A2P50993 1020 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 TIAL1Q01085 375 aaKnown RBP eCLIP16.16■□□□□ 0.18
APTR-201ENST00000398043 ACY1Q03154 408 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 TUBB3Q13509 450 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 THOC5Q13769 683 aaKnown RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 BBS9Q3SYG4 887 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 SOWAHCQ53LP3 525 aaPredicted RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 HSP90AA5PQ58FG0 334 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 SPANXN3Q5MJ09 141 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 MANEAQ5SRI9 462 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 STEAP4Q687X5 459 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 SPESP1Q6UW49 350 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 ZNF572Q7Z3I7 529 aaPredicted RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 KCNMB4Q86W47 210 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 BPHLQ86WA6 291 aaPredicted RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 PPP1R3BQ86XI6 285 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 RASGRP3Q8IV61 690 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 SPNS2Q8IVW8 549 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 DCUN1D3Q8IWE4 304 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 CNTN4Q8IWV2 1026 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 NLGN4XQ8N0W4 816 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 C2CD4AQ8NCU7 369 aaPredicted RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 NLGN4YQ8NFZ3 816 aaPredicted RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 GIMAP7Q8NHV1 300 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 CALML6Q8TD86 181 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 TTC9Q92623 222 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 ZNF501Q96CX3 271 aaPredicted RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 SNF8Q96H20 258 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 NAT9Q9BTE0 207 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 ULBP3Q9BZM4 244 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 FBXO6Q9NRD1 293 aaPredicted RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 TDRKHQ9Y2W6 561 aaKnown RBP16.16■□□□□ 0.18
APTR-201ENST00000398043 PCDHGA4Q9Y5G9 962 aa16.16■□□□□ 0.18
APTR-201ENST00000398043 LOC101059948A0A1B0GTJ6 334 aa16.15■□□□□ 0.18
APTR-201ENST00000398043 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
APTR-201ENST00000398043 E7ESA3 106 aa16.15■□□□□ 0.18
APTR-201ENST00000398043 TERTO14746 1132 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms