RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SLC13A3Q8WWT9 602 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 NELL2Q99435 816 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ACTR8Q9H981 624 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PHPT1Q9NRX4 125 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-206ENST00000397617 OR6C2Q9NZP2 312 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 KIR3DL1P43629 444 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 MAXP61244 160 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 DHCR24Q15392 516 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PCSK7Q16549 785 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 ZRANB3Q5FWF4 1079 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 CRTC1Q6UUV9 634 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 OR52B2Q96RD2 323 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TCF25Q9BQ70 676 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 HGH1Q9BTY7 390 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 C20orf27Q9GZN8 174 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM245Q9H330 911 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 GKN1Q9NS71 199 aa5.74□□□□□ -1.49
PTPRD-206ENST00000397617 PTPRSQ13332 1948 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 TRIM43BA6NCK2 446 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 E9PBE3 544 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 AURKAO14965 403 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SYNCRIPO60506 623 aaKnown RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CRCPO75575 148 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CYP17A1P05093 508 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ATP1B2P14415 290 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 IGFBP6P24592 240 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SH3BP2P78314 561 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 DEFB103AP81534 67 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 KDSRQ06136 332 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CBX2Q14781 532 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MANEAQ5SRI9 462 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PSMA8Q8TAA3 256 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CHTF18Q8WVB6 975 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 GATA6Q92908 595 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 TRIM43Q96BQ3 446 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 DTNBP1Q96EV8 351 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CEP41Q9BYV8 373 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF696Q9H7X3 374 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ZFP14Q9HCL3 533 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SLC52A3Q9NQ40 469 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 TMPRSS4Q9NRS4 437 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 RPS6KA6Q9UK32 745 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CCDC154A6NI56 674 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 RPL5P46777 297 aaKnown RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CAPZA2P47755 286 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 GTF2H3Q13889 308 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 GRM2Q14416 872 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 HIST2H2ACQ16777 129 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 HIST2H2AA3Q6FI13 130 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 GRHL2Q6ISB3 625 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 C16orf46Q6P387 395 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 NAPRTQ6XQN6 538 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MED25Q71SY5 747 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 BBS7Q8IWZ6 715 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SUSD6Q92537 303 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 AP2M1Q96CW1 435 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PNPOQ9NVS9 261 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 IFT80Q9P2H3 777 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ALPK2Q86TB3 2170 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PRR19A6NJB7 356 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ELFN1P0C7U0 828 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MPSTP25325 297 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 FASP25445 335 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ARPP19P56211 112 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 TUBA3CQ13748 450 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ITPRIPL2Q3MIP1 535 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MILR1Q7Z6M3 343 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 DEFB128Q7Z7B8 93 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 DHFR2Q86XF0 187 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 FUNDC1Q8IVP5 155 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PJA1Q8NG27 643 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 OR13C4Q8NGS5 318 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PROKR1Q8TCW9 393 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 COX14Q96I36 57 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CGREF1Q99674 301 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 RHBGQ9H310 441 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ACSS1Q9NUB1 689 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 WWOXQ9NZC7 414 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SLC2A6Q9UGQ3 507 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ZDHHC2Q9UIJ5 367 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ENTPD2Q9Y5L3 495 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PLXND1Q9Y4D7 1925 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ARRDC5A6NEK1 342 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ENTPD5O75356 428 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ANPEPP15144 967 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 GM2AP17900 193 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MAP4P27816 1152 aaKnown RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 NUDT2P50583 147 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 KIAA1024LP59773 190 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PSPHP78330 225 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PWP1Q13610 501 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 STARD3Q14849 445 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 RBBP5Q15291 538 aaKnown RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 LIPIQ6XZB0 460 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 C16orf59Q7L2K0 433 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SLC41A1Q8IVJ1 513 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 BHLHE22Q8NFJ8 381 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 NUF2Q9BZD4 464 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms