RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CBSLP0DN79 551 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 SKILP12757 684 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 MSH3P20585 1137 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 CBSP35520 551 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 DCDP81605 110 aaKnown RBP9.08□□□□□ -0.96
NEDD9-203ENST00000397378 AP1B1Q10567 949 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 DSG2Q14126 1118 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 KRT33BQ14525 404 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 INAQ16352 499 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 PPP2R5EQ16537 467 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 LONRF1Q17RB8 773 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 BCL7AQ4VC05 210 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 MRPL14Q6P1L8 145 aaKnown RBP9.08□□□□□ -0.96
NEDD9-203ENST00000397378 FAM151BQ6UXP7 276 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 CDHR3Q6ZTQ4 885 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 PLD5Q8N7P1 536 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 SPATA22Q8NHS9 363 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 CA5BP1Q8WTZ4 195 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 LCN9Q8WX39 176 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 TRIM56Q9BRZ2 755 aaKnown RBP9.08□□□□□ -0.96
NEDD9-203ENST00000397378 CCM2Q9BSQ5 444 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 CEP41Q9BYV8 373 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 GLOD4Q9HC38 313 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 SLC6A20Q9NP91 592 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 HACD3Q9P035 362 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 IFT80Q9P2H3 777 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-203ENST00000397378 NDOR1Q9UHB4 597 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 GTF3C1Q12789 2109 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 MAP1AP78559 2803 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-203ENST00000397378 ABCA4P78363 2273 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 CPAMD8Q8IZJ3 1885 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 A0A0A6YYK5 440 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-203ENST00000397378 CCDC66A2RUB6 948 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 C2orf74A8MZ97 194 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 BTN3A3O00478 584 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 CNOT3O75175 753 aaKnown RBP9.07□□□□□ -0.96
NEDD9-203ENST00000397378 PMPCBO75439 489 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 OR2B3O76000 313 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 UMODP07911 640 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 PVRP15151 417 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 MMP11P24347 488 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 KDELR1P24390 212 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 MST1P26927 711 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 AKT1P31749 480 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 GJC1P36383 396 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 GABRA4P48169 554 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 FOXL2P58012 376 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 ADAM8P78325 824 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 ARG2P78540 354 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 GSE1Q14687 1217 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 PDK1Q15118 436 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 GLIPR1L2Q4G1C9 344 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 TEX44Q53QW1 395 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 FAM182AQ5T1J6 154 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 SLC9A4Q6AI14 798 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 NCCRP1Q6ZVX7 275 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-203ENST00000397378 VSIG1Q86XK7 387 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 ACBD4Q8NC06 268 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 HM13Q8TCT9 377 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 ZNF398Q8TD17 642 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 ADAMTS18Q8TE60 1221 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 ARSGQ96EG1 525 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 MAGED4Q96JG8 741 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 OLFM3Q96PB7 478 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 TREX2Q9BQ50 279 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-203ENST00000397378 TFB2MQ9H5Q4 396 aaKnown RBP9.07□□□□□ -0.96
NEDD9-203ENST00000397378 FAM60AQ9NP50 221 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 ANO10Q9NW15 660 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 FBXL4Q9UKA2 621 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 CDYLQ9Y232 598 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 PKP3Q9Y446 797 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 HEY1Q9Y5J3 304 aa9.07□□□□□ -0.96
NEDD9-203ENST00000397378 FLNAP21333 2647 aaKnown RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 C17orf113A0A1B0GUU1 675 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 FOXO6A8MYZ6 492 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 PPP1R12AO14974 1030 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 SGTAO43765 313 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 PROSCO94903 275 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 ZWINTO95229 277 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 CRYABP02511 175 aaKnown RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 POLBP06746 335 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 PCSK6P29122 969 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 WNT3AP56704 352 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 TAS2R40P59535 323 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 MFAP5Q13361 173 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 SLC9A5Q14940 896 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 NOMO1Q15155 1222 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 NKAIN1Q4KMZ8 207 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 SIRPB2Q5JXA9 342 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 C1orf189Q5VU69 101 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 CES4AQ5XG92 561 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 TLDC1Q6P9B6 456 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 SARM1Q6SZW1 724 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 SPESP1Q6UW49 350 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 KDELC1Q6UW63 502 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 ISLR2Q6UXK2 745 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 DET1Q7L5Y6 550 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 AMIGO1Q86WK6 493 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 CPNE8Q86YQ8 564 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 CFAP206Q8IYR0 622 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms