RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 CBSLP0DN79 551 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 FGF3P11487 239 aaPredicted RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CCL4P13236 92 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ENO3P13929 434 aaPredicted RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ITIH1P19827 911 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CSTF2P33240 577 aaKnown RBP eCLIP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CBSP35520 551 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ETV5P41161 510 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 SKIV2L2P42285 1042 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CDKN2DP55273 166 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ERVPABLB-1P60509 514 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 KYNUQ16719 465 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 KLHL38Q2WGJ6 581 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 TBC1D25Q3MII6 688 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 FAM92BQ6ZTR7 304 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CEP128Q6ZU80 1094 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 STRA8Q7Z7C7 330 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CLEC14AQ86T13 490 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ZC3HC1Q86WB0 502 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 PROSER1Q86XN7 944 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 RASGRP3Q8IV61 690 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ADGRF3Q8IZF5 1079 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CARFQ8N187 725 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 BMPERQ8N8U9 685 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 CFAP61Q8NHU2 1237 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 IFT81Q8WYA0 676 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ZCCHC14Q8WYQ9 949 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 KLHL6Q8WZ60 621 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 ZNF578Q96N58 590 aaPredicted RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 TSPYL1Q9H0U9 437 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 XKR8Q9H6D3 395 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 TAS2R13Q9NYV9 303 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 OR6C2Q9NZP2 312 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 PISDQ9UG56 409 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 POMT2Q9UKY4 750 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 RUVBL2Q9Y230 463 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 TDRKHQ9Y2W6 561 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 PCDHGA7Q9Y5G6 932 aa17.25■□□□□ 0.35
TNFSF13-204ENST00000396542 TLCD2A6NGC4 264 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 CXorf49A8MYA2 514 aaPredicted RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 B4E171 279 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 PSIP1O75475 530 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 MPC1LP0DKB6 136 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 POLR2CP19387 275 aaPredicted RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 FDXRP22570 491 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 RBMS1P29558 406 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 CCNFP41002 786 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 TSPAN7P41732 249 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 KPNA2P52292 529 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 ILF2Q12905 390 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 CUL1Q13616 776 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 HECTD2Q5U5R9 776 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 CACHD1Q5VU97 1274 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 FAM45BPQ6NSW5 357 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 UGT3A1Q6NUS8 523 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 FOXR1Q6PIV2 292 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 SPNS2Q8IVW8 549 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 FAM45AQ8TCE6 357 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 SKA2Q8WVK7 121 aaPredicted RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 CDKL2Q92772 493 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 FOPNLQ96NB1 174 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 FMO2Q99518 471 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 B3GNT4Q9C0J1 378 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 OCIAD1Q9NX40 245 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 SIDT1Q9NXL6 827 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 TRMT6Q9UJA5 497 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 DMXL2Q8TDJ6 3036 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 USP24Q9UPU5 2620 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 APC2O95996 2303 aa17.24■□□□□ 0.35
TNFSF13-204ENST00000396542 ESPNB1AK53 854 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 AGRPO00253 132 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 TAF4O00268 1085 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 RASSF9O75901 435 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 PIAS1O75925 651 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 PKLRP30613 574 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 RAB28P51157 221 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 PRKAA1Q13131 559 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 ARMC6Q6NXE6 501 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 CYHR1Q6ZMK1 362 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 IFT20Q8IY31 132 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 CPNE9Q8IYJ1 553 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 UBXN4Q92575 508 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 RAD51AP1Q96B01 352 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 SLC41A2Q96JW4 573 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 MAP3K3Q99759 626 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 OLFM1Q99784 485 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 PITPNM3Q9BZ71 974 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 RHOJQ9H4E5 214 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 THSD1Q9NS62 852 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 PLAGL1Q9UM63 463 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 VWA7Q9Y334 891 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 PCDHGA3Q9Y5H0 932 aa17.23■□□□□ 0.35
TNFSF13-204ENST00000396542 ANKRD11Q6UB99 2663 aaPredicted RBP17.22■□□□□ 0.35
TNFSF13-204ENST00000396542 IGHV5-51A0A0C4DH38 117 aa17.22■□□□□ 0.35
TNFSF13-204ENST00000396542 EFCAB7A8K855 629 aa17.22■□□□□ 0.35
TNFSF13-204ENST00000396542 C2orf74A8MZ97 194 aa17.22■□□□□ 0.35
TNFSF13-204ENST00000396542 RASGRF2O14827 1237 aa17.22■□□□□ 0.35
TNFSF13-204ENST00000396542 NVLO15381 856 aaKnown RBP17.22■□□□□ 0.35
TNFSF13-204ENST00000396542 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms