RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CHRM5P08912 532 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-205ENST00000395794 MSL3P1P0C860 447 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 ST6GAL1P15907 406 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 PAMP19021 973 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 NMBRP28336 390 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 CCR7P32248 378 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 TERF1P54274 439 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 ABRQ12979 859 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 SEMA3AQ14563 771 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 RNF187Q5TA31 235 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-205ENST00000395794 CASC4Q6P4E1 433 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 LDB1Q86U70 411 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-205ENST00000395794 GPR135Q8IZ08 494 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 SLC22A15Q8IZD6 547 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 ADGRF3Q8IZF5 1079 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 CFAP61Q8NHU2 1237 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 SKA2Q8WVK7 121 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-205ENST00000395794 TCTN2Q96GX1 697 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 TRAPPC9Q96Q05 1148 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 KIFC1Q9BW19 673 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 AP1M1Q9BXS5 423 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 KLHL25Q9H0H3 589 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 ACTL8Q9H568 366 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 GRPEL1Q9HAV7 217 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 MRM3Q9HC36 420 aaKnown RBP13.31□□□□□ -0.28
CXCL12-205ENST00000395794 TREX1Q9NSU2 369 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 SAMD15Q9P1V8 674 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 MARCH4Q9P2E8 410 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-205ENST00000395794 GOLGA6L10A0A0M3HER8 536 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 CDC14CA4D256 554 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 IQCF5A8MTL0 148 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 ISM1B1AKI9 464 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 E7EQ34 232 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 MEN1O00255 615 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 PGRMC1O00264 195 aaKnown RBP13.3□□□□□ -0.28
CXCL12-205ENST00000395794 KIF5CO60282 957 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 VAPBO95292 243 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 HBQ1P09105 142 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 UGT2B7P16662 529 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 PTPN4P29074 926 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 ITGA1P56199 1179 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 KIR2DS3Q14952 304 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 ATP1A1-AS1Q5TC04 95 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 ARMC3Q5W041 872 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 FAM199XQ6PEV8 388 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-205ENST00000395794 UNC5DQ6UXZ4 953 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 ATG14Q6ZNE5 492 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 OTOAQ7RTW8 1153 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 KRT222Q8N1A0 295 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 RAB42Q8N4Z0 105 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 C9orf43Q8TAL5 461 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-205ENST00000395794 ANP32BQ92688 251 aaKnown RBP13.3□□□□□ -0.28
CXCL12-205ENST00000395794 SLC22A18Q96BI1 424 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 FOPNLQ96NB1 174 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 LRFN5Q96NI6 719 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 ACTR5Q9H9F9 607 aaPredicted RBP13.3□□□□□ -0.28
CXCL12-205ENST00000395794 SYBUQ9NX95 663 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 FARSAQ9Y285 508 aaKnown RBP13.3□□□□□ -0.28
CXCL12-205ENST00000395794 MRFAP1Q9Y605 127 aa13.3□□□□□ -0.28
CXCL12-205ENST00000395794 BAHCC1Q9P281 2608 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 CFAP46Q8IYW2 2715 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 PIEZO2Q9H5I5 2752 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 FASNP49327 2511 aaKnown RBP13.29□□□□□ -0.28
CXCL12-205ENST00000395794 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.29□□□□□ -0.28
CXCL12-205ENST00000395794 MAGEB16A2A368 324 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 H3BMM5 538 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 TERTO14746 1132 aaKnown RBP13.29□□□□□ -0.28
CXCL12-205ENST00000395794 GPC4O75487 556 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 PVRP15151 417 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 AGXTP21549 392 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 AOAHP28039 575 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 RAB28P51157 221 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 EIF3BP55884 814 aaKnown RBP13.29□□□□□ -0.28
CXCL12-205ENST00000395794 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
CXCL12-205ENST00000395794 SYVN1Q86TM6 617 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 DCUN1D3Q8IWE4 304 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 C19orf47Q8N9M1 422 aaKnown RBP13.29□□□□□ -0.28
CXCL12-205ENST00000395794 OR1L3Q8NH93 324 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 GRK7Q8WTQ7 553 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 MFSD3Q96ES6 412 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 MS4A14Q96JA4 679 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 OR2A14Q96R47 310 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 TCF12Q99081 682 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 NRTNQ99748 197 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 XAB2Q9HCS7 855 aaKnown RBP13.29□□□□□ -0.28
CXCL12-205ENST00000395794 IRAK4Q9NWZ3 460 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 SLC39A10Q9ULF5 831 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 PLAGL1Q9UM63 463 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 SOX13Q9UN79 622 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 VPS9D1Q9Y2B5 631 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 MAN2B2Q9Y2E5 1009 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 KCNMB2Q9Y691 235 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 AP1M2Q9Y6Q5 423 aa13.29□□□□□ -0.28
CXCL12-205ENST00000395794 GCN1Q92616 2671 aaKnown RBP13.28□□□□□ -0.28
CXCL12-205ENST00000395794 A0A0J9YY10 115 aa13.28□□□□□ -0.28
CXCL12-205ENST00000395794 TCRBV7S3A2A0A539 114 aa13.28□□□□□ -0.28
CXCL12-205ENST00000395794 SDR42E2A6NKP2 422 aa13.28□□□□□ -0.28
CXCL12-205ENST00000395794 MKRN2OSH3BPM6 223 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms