RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 NUDT8Q8WV74 236 aa18.58■□□□□ 0.56
CLDND1-203ENST00000394181 PKP4Q99569 1192 aa18.58■□□□□ 0.56
CLDND1-203ENST00000394181 EFCAB1Q9HAE3 211 aa18.58■□□□□ 0.56
CLDND1-203ENST00000394181 CCL27Q9Y4X3 112 aa18.58■□□□□ 0.56
CLDND1-203ENST00000394181 TRPM6Q9BX84 2022 aa18.58■□□□□ 0.56
CLDND1-203ENST00000394181 H3BM21 787 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 VPS4BO75351 444 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 KRT36O76013 467 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 STX1BP61266 288 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 CDK3Q00526 305 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 CDC16Q13042 620 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 CPSF6Q16630 551 aaKnown RBP eCLIP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 OGFOD2Q6N063 350 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 MIER2Q8N344 545 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 CDRT15Q96T59 188 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 ZCCHC2Q9C0B9 1178 aaKnown RBP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 SDR39U1Q9NRG7 319 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 INTS7Q9NVH2 962 aaKnown RBP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 SHISA7A6NL88 538 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 EBLN1P0CF75 366 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 MAP4P27816 1152 aaKnown RBP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 MSX2P35548 267 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 HNMTP50135 292 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 AP1S2P56377 157 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 HMGCS1Q01581 520 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 ART3Q13508 389 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 IRF4Q15306 451 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 VPS26BQ4G0F5 336 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 REP15Q6BDI9 236 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 METTL2BQ6P1Q9 378 aaKnown RBP18.57■□□□□ 0.56
CLDND1-203ENST00000394181 LAYNQ6UX15 382 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 RNF148Q8N7C7 305 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 FNDC5Q8NAU1 212 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 ACTR8Q9H981 624 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 WDR41Q9HAD4 459 aa18.57■□□□□ 0.56
CLDND1-203ENST00000394181 NR5A2O00482 541 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 LSM1O15116 133 aaKnown RBP18.56■□□□□ 0.56
CLDND1-203ENST00000394181 SLC16A8O95907 504 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 MAT2AP31153 395 aaKnown RBP18.56■□□□□ 0.56
CLDND1-203ENST00000394181 NEK2P51955 445 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 UFM1P61960 85 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 GTF2H3Q13889 308 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 STARD3Q14849 445 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 RFTN2Q52LD8 501 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-203ENST00000394181 C1orf146Q5VVC0 180 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 SDE2Q6IQ49 451 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 SPATA19Q7Z5L4 167 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 NET1Q7Z628 596 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-203ENST00000394181 FAM124AQ86V42 546 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 RETREG3Q86VR2 466 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 FBXW8Q8N3Y1 598 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 FBXL8Q96CD0 374 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 MRPL1Q9BYD6 325 aaKnown RBP18.56■□□□□ 0.56
CLDND1-203ENST00000394181 AIG1Q9NVV5 245 aa18.56■□□□□ 0.56
CLDND1-203ENST00000394181 STOX2Q9P2F5 926 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-203ENST00000394181 PABPN1LA6NDY0 278 aaKnown RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 MANBAO00462 879 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 VEGFDO43915 354 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 CLDN9O95484 217 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 FUCA1P04066 466 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 CAPN3P20807 821 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 CCND1P24385 295 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 ACADVLP49748 655 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 LRP8Q14114 963 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 RPS6KA2Q15349 733 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 NR6A1Q15406 480 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 ATP6AP1LQ52LC2 224 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 LRRC70Q7Z2Q7 622 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 TRMT11Q7Z4G4 463 aaKnown RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 RALGPS2Q86X27 583 aaPredicted RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 TCAIMQ8N3R3 496 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 LINC00615Q96LM1 132 aaPredicted RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 RNPEPL1Q9HAU8 725 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 RIC8BQ9NVN3 520 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 ZNF490Q9ULM2 529 aaPredicted RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 ZFC3H1O60293 1989 aaKnown RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 A0A1W2PQU0 124 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 C1orf105O95561 183 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 IDO1P14902 403 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 ZFP36L2P47974 494 aaKnown RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 MTTPP55157 894 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 ERVK-8P63133 956 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 NAE1Q13564 534 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 AP5B1Q2VPB7 878 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 MMEL1Q495T6 779 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 AGTRAPQ6RW13 159 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 C16orf89Q6UX73 402 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 TP53I13Q8NBR0 393 aaPredicted RBP18.55■□□□□ 0.56
CLDND1-203ENST00000394181 MED8Q96G25 268 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 FZD3Q9NPG1 666 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 SLC52A3Q9NQ40 469 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 TRPS1Q9UHF7 1281 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 GPR34Q9UPC5 381 aa18.55■□□□□ 0.56
CLDND1-203ENST00000394181 KCNE1BA0A087WTH5 132 aa18.54■□□□□ 0.56
CLDND1-203ENST00000394181 LIN7AO14910 233 aaPredicted RBP18.54■□□□□ 0.56
CLDND1-203ENST00000394181 PLRG1O43660 514 aaKnown RBP18.54■□□□□ 0.56
CLDND1-203ENST00000394181 NRP2O60462 931 aa18.54■□□□□ 0.56
CLDND1-203ENST00000394181 ULK1O75385 1050 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms