RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 BTBD10Q9BSF8 475 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 TUBB1Q9H4B7 451 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 ARHGEF3Q9NR81 526 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 TM7SF3Q9NS93 570 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 GIMAP2Q9UG22 337 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 SLC23A2Q9UGH3 650 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 FBXL21Q9UKT6 434 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 DUSP12Q9UNI6 340 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 COPG1Q9Y678 874 aaKnown RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 MEI4A8MW99 385 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 LOC730098B7Z3J9 87 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 FFAR3O14843 346 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 KMOO15229 486 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 GPR42O15529 346 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 KRT16P08779 473 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 COX4I1P13073 169 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 PIK3R1P27986 724 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 TEAD1P28347 426 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 GGT5P36269 586 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 MAGEA9P43362 315 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CCR3P51677 355 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 MNAT1P51948 309 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CDC16Q13042 620 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 TRAF3Q13114 568 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 TSTA3Q13630 321 aaPredicted RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 PUS10Q3MIT2 529 aaKnown RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 CCSMST1Q4G0I0 132 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 ZNF658BQ4V348 819 aaPredicted RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 TTC23LQ6PF05 361 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 LARP4Q71RC2 724 aaKnown RBP eCLIP8.42□□□□□ -1.06
TDP1-203ENST00000393454 CHST15Q7LFX5 561 aaPredicted RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 C11orf96Q7Z7L8 435 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CPSF7Q8N684 471 aaKnown RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 ATL1Q8WXF7 558 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 PKP4Q99569 1192 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 APOOQ9BUR5 198 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 TBC1D10AQ9BXI6 508 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 ACTR8Q9H981 624 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 SLC40A1Q9NP59 571 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 DNAJC11Q9NVH1 559 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 PSMD13Q9UNM6 376 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 SLC22A14Q9Y267 594 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 RNF11Q9Y3C5 154 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 PEX11AO75192 247 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 VPS4BO75351 444 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CLDN9O95484 217 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 C1orf105O95561 183 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CHRNB1P11230 501 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 ACP5P13686 325 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 LBPP18428 481 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 SLC6A12P48065 614 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 DGKEP52429 567 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CLDN2P57739 230 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 STX1BP61266 288 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 NAE1Q13564 534 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CUL3Q13618 768 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 LRRC32Q14392 662 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 GRB7Q14451 532 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 RPS6KA2Q15349 733 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 ZXDCQ2QGD7 858 aaPredicted RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 KIF19Q2TAC6 998 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 SGO1Q5FBB7 561 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 ANO7Q6IWH7 933 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 AGTRAPQ6RW13 159 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 SNX32Q86XE0 403 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 GALNT13Q8IUC8 556 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 PPFIBP2Q8ND30 876 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 SPDYE1Q8NFV5 336 aaPredicted RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 OR2T34Q8NGX1 318 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 MCUR1Q96AQ8 359 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 NTMT1Q9BV86 223 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 DPEP2Q9H4A9 486 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 OSGEPL1Q9H4B0 414 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 SGK2Q9HBY8 427 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 PRM3Q9NNZ6 103 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 ITM2CQ9NQX7 267 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 RIC8BQ9NVN3 520 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 TAS2R1Q9NYW7 299 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 STOX2Q9P2F5 926 aaPredicted RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 KLQ9UEF7 1012 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 POLG2Q9UHN1 485 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 ASF1AQ9Y294 204 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 CA5BQ9Y2D0 317 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 MRPS17Q9Y2R5 130 aaKnown RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 GPSM3Q9Y4H4 160 aa8.42□□□□□ -1.06
TDP1-203ENST00000393454 DNMT3AQ9Y6K1 912 aaPredicted RBP8.42□□□□□ -1.06
TDP1-203ENST00000393454 GPR89AB7ZAQ6 455 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 PSMD12O00232 456 aaPredicted RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 IFRD1O00458 451 aaPredicted RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 STK25O00506 426 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 FPGTO14772 594 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CLGNO14967 610 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SLC22A2O15244 555 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SEMA4FO95754 770 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SLC16A8O95907 504 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 EBLN1P0CF75 366 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 GPR89BP0CG08 455 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 THRAP10827 490 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 RPL10P27635 214 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 PRDX6P30041 224 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms