RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 COPEO14579 308 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 NDUFS2O75306 463 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 SAT1P21673 171 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 SPRP35270 261 aaPredicted RBP18.62■□□□□ 0.57
CCDC50-202ENST00000392456 HAAOP46952 286 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 CLCQ05315 142 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 C22orf39Q6P5X5 142 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 CNSTQ6PJW8 725 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 VITQ6UXI7 678 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 DPY19L3Q6ZPD9 716 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 Q6ZVU0 165 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 AFAP1L2Q8N4X5 818 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 OR4K2Q8NGD2 314 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 OR5H6Q8NGV6 325 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 JPH3Q8WXH2 748 aaPredicted RBP18.62■□□□□ 0.57
CCDC50-202ENST00000392456 REXO5Q96IC2 774 aaKnown RBP18.62■□□□□ 0.57
CCDC50-202ENST00000392456 RPP25Q9BUL9 199 aaKnown RBP18.62■□□□□ 0.57
CCDC50-202ENST00000392456 S1PR5Q9H228 398 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 BPIFA1Q9NP55 256 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 GDE1Q9NZC3 331 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 FBXO5Q9UKT4 447 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 TRIOO75962 3097 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 TULP3O75386 442 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 DBTP11182 482 aaKnown RBP18.61■□□□□ 0.57
CCDC50-202ENST00000392456 PAMP19021 973 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 BTF3P20290 206 aaKnown RBP18.61■□□□□ 0.57
CCDC50-202ENST00000392456 CNTFP26441 200 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 TMBIM6P55061 237 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 GPLD1P80108 840 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 CCNJQ5T5M9 372 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 RSBN1Q5VWQ0 802 aaPredicted RBP18.61■□□□□ 0.57
CCDC50-202ENST00000392456 C16orf46Q6P387 395 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 GLT6D1Q7Z4J2 308 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF366Q8N895 744 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 CHST14Q8NCH0 376 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 MRGPRX3Q96LB0 322 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 TRIM39Q9HCM9 518 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 HPS4Q9NQG7 708 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 SNX15Q9NRS6 342 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 NUP50Q9UKX7 468 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 PGLSO95336 258 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 GOT2P00505 430 aaKnown RBP18.61■□□□□ 0.57
CCDC50-202ENST00000392456 UGT2B4P06133 528 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 HOXB1P14653 301 aaPredicted RBP18.61■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF140P52738 457 aaPredicted RBP18.61■□□□□ 0.57
CCDC50-202ENST00000392456 AP1S1P61966 158 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 ACVR1Q04771 509 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 BST1Q10588 318 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 SEMA3AQ14563 771 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 HERC3Q15034 1050 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 FAM47BQ8NA70 645 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 C2CD4AQ8NCU7 369 aaPredicted RBP18.61■□□□□ 0.57
CCDC50-202ENST00000392456 MYO19Q96H55 970 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 ADGRE3Q9BY15 652 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 CIPCQ9C0C6 399 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 POLR1BQ9H9Y6 1135 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 SLC39A10Q9ULF5 831 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 VPS4AQ9UN37 437 aa18.61■□□□□ 0.57
CCDC50-202ENST00000392456 KRT8P05787 483 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 TYK2P29597 1187 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 DGKGP49619 791 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 PRAMEP78395 509 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 BCL2L1Q07817 233 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 LAPTM5Q13571 262 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 METTL3Q86U44 580 aaKnown RBP18.6■□□□□ 0.57
CCDC50-202ENST00000392456 PLD6Q8N2A8 252 aaKnown RBP18.6■□□□□ 0.57
CCDC50-202ENST00000392456 CADM2Q8N3J6 435 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 CDKN2AIPNLQ96HQ2 116 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 TMEM246Q9BRR3 403 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 COQ10BQ9H8M1 238 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 LIN7BQ9HAP6 207 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 GTSE1Q9NYZ3 720 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF229Q9UJW7 825 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 FNDC3AQ9Y2H6 1198 aaKnown RBP18.6■□□□□ 0.57
CCDC50-202ENST00000392456 PRRT4C9JH25 899 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 HTRA2O43464 458 aaPredicted RBP18.6■□□□□ 0.57
CCDC50-202ENST00000392456 EPN2O95208 641 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 LTBRP36941 435 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 IRF9Q00978 393 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 OCA2Q04671 838 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 TUBB3Q13509 450 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF460Q14592 562 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 ARMC12Q5T9G4 340 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 CES4AQ5XG92 561 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 ETFBKMTQ8IXQ9 262 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 FGF14Q92915 247 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 NXPE3Q969Y0 559 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 CITED4Q96RK1 184 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 EBF4Q9BQW3 602 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 MECRQ9BV79 373 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 PRO3102Q9H379 93 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 RHOJQ9H4E5 214 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 ERVW-1Q9UQF0 538 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 PLLPQ9Y342 182 aa18.6■□□□□ 0.57
CCDC50-202ENST00000392456 GPR39O43194 453 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 KCNH1O95259 989 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 IGSF6O95976 241 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 CDKN1CP49918 316 aaPredicted RBP18.59■□□□□ 0.57
CCDC50-202ENST00000392456 PRKAA2P54646 552 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 RAD23AP54725 363 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms