RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
RPAIN-202ENST00000381208 LRRK2Q5S007 2527 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 SLC5A10A0PJK1 596 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 CCDC78A2IDD5 438 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 CCDC162PA2VCL2 907 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 LIASO43766 372 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 KLHL41O60662 606 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 IFNB1P01574 187 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 IGHEP01854 428 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ACADLP28330 430 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 RRADP55042 308 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 PRAMEP78395 509 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ABRQ12979 859 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 PRKG2Q13237 762 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 KIR2DS3Q14952 304 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 OASLQ15646 514 aaKnown RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 TSTD2Q5T7W7 516 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 FBXO38Q6PIJ6 1188 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 MED25Q71SY5 747 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 TMEM135Q86UB9 458 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 RAB43Q86YS6 212 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 SLC13A5Q86YT5 568 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 SYTL1Q8IYJ3 562 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ENDOVQ8N8Q3 282 aaKnown RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 CCDC89Q8N998 374 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 C19orf47Q8N9M1 422 aaKnown RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 SLC38A9Q8NBW4 561 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 OR4L1Q8NH43 312 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 OR1L3Q8NH93 324 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 DENND1AQ8TEH3 1009 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 HDAC10Q969S8 669 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 SLC22A18Q96BI1 424 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 PPM1MQ96MI6 270 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ING2Q9H160 280 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ETNK1Q9HBU6 452 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 MLXIPLQ9NP71 852 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 PCMTD2Q9NV79 361 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ANAPC5Q9UJX4 755 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ZNF451Q9Y4E5 1061 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 PIKFYVEQ9Y2I7 2098 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 SPTBP11277 2137 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 A0A0J9YY10 115 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 VARSP26640 1264 aaKnown RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 CD97P48960 835 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 RPS18P62269 152 aaKnown RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ACVR1Q04771 509 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 NCF4Q15080 339 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 SLC5A12Q1EHB4 618 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ZNF789Q5FWF6 425 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 PAPD7Q5XG87 772 aaKnown RBP12.56□□□□□ -0.4
RPAIN-202ENST00000381208 UNC5AQ6ZN44 842 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 OR5AR1Q8NGP9 310 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 OR13J1Q8NGT2 312 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 PROKR1Q8TCW9 393 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 MAIP1Q8WWC4 291 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ASZ1Q8WWH4 475 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 MIB2Q96AX9 1013 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 DESI2Q9BSY9 194 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 CARD6Q9BX69 1037 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ICKQ9UPZ9 632 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 ZKSCAN5Q9Y2L8 839 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 MRFAP1Q9Y605 127 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 CAPN6Q9Y6Q1 641 aa12.56□□□□□ -0.4
RPAIN-202ENST00000381208 TCRBV7S2A1N4TA0A589 114 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 ARGFXA6NJG6 315 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 ZNF749O43361 778 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 OR2B3O76000 313 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 TMEM63AO94886 807 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 FKBP9O95302 570 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 GOT2P00505 430 aaKnown RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 APOA4P06727 396 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 CHRM5P08912 532 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 PRSS56P0CW18 603 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 UGT2B7P16662 529 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 TTPAP49638 278 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 RAB28P51157 221 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 CCL11P51671 97 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 IL10RAQ13651 578 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 UBAP2LQ14157 1087 aaKnown RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 TMED2Q15363 201 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 CCDC38Q502W7 563 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 COLEC12Q5KU26 742 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 TLDC1Q6P9B6 456 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 DRICH1Q6PGQ1 229 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 FAM198BQ6UWH4 519 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 CDHR3Q6ZTQ4 885 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 MPP5Q8N3R9 675 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 PPHLN1Q8NEY8 458 aaKnown RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 OR6P1Q8NGX9 317 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 ADAMTS17Q8TE56 1095 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 ATG4AQ8WYN0 398 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 OR2A14Q96R47 310 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 RUFY1Q96T51 708 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 TRIM55Q9BYV6 548 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 XKR8Q9H6D3 395 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 GRPEL1Q9HAV7 217 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms