RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CNIH3Q8TBE1 160 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 PNPT1Q8TCS8 783 aaKnown RBP15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 FKBP10Q96AY3 582 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 CPQQ9Y646 472 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 GNGT2O14610 69 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 BCAS1O75363 584 aaPredicted RBP15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 TULP3O75386 442 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 COL6A1P12109 1028 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 JUNBP17275 347 aaPredicted RBP15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 PWP1Q13610 501 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 SPANXN4Q5MJ08 99 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 APCDD1Q8J025 514 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 SLAIN1Q8ND83 568 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 ZNF548Q8NEK5 533 aaPredicted RBP15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 ABHD11Q8NFV4 315 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 RAB2BQ8WUD1 216 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 SDCCAG3Q96C92 435 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 SLC47A1Q96FL8 570 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 NEURL2Q9BR09 285 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 HPS4Q9NQG7 708 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 PDE10AQ9Y233 779 aa15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 KIAA0100Q14667 2235 aaKnown RBP15.94■□□□□ 0.14
NKX3-1-201ENST00000380871 HS6ST1O60243 411 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 TRIM16O95361 564 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ZNF12P17014 697 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 LSM3P62310 102 aaKnown RBP15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 PHEXP78562 749 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 BTG3Q14201 252 aaPredicted RBP15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 SLC8B1Q6J4K2 584 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 CRTC3Q6UUV7 619 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 FRA10AC1Q70Z53 315 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 RAD21L1Q9H4I0 556 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ACTR8Q9H981 624 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ZNF334Q9HCZ1 680 aaPredicted RBP15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 PCDH12Q9NPG4 1184 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 FAM8A1Q9UBU6 413 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 AFF4Q9UHB7 1163 aaKnown RBP15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ST14Q9Y5Y6 855 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 SLC30A1Q9Y6M5 507 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 SERPINB7O75635 380 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 C1QCP02747 245 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ACRP10323 421 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ZXDBP98169 803 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 PPP2R2BQ00005 443 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 KIAA0040Q15053 153 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 PERM1Q5SV97 790 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 CXorf57Q6NSI4 855 aaKnown RBP15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 EFL1Q7Z2Z2 1120 aaKnown RBP15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 LEMD2Q8NC56 503 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 CHPT1Q8WUD6 406 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 SLC13A3Q8WWT9 602 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 MYLIPQ8WY64 445 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 OSBPL10Q9BXB5 764 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 IPPKQ9H8X2 491 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ELOVL2Q9NXB9 296 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 THSD7BQ9C0I4 1608 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 PLXNA3P51805 1871 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 ILVBLA1L0T0 632 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 MITFO75030 526 aaPredicted RBP15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 FKTNO75072 461 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 PFKLP17858 780 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 GSTM2P28161 218 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 DEFB103AP81534 67 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 GTF2H2Q13888 395 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 GTF2H2CQ6P1K8 395 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 GCNT7Q6ZNI0 430 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 MILR1Q7Z6M3 343 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 GALNT5Q7Z7M9 940 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 TMCO5AQ8N6Q1 288 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 GTF2H4Q92759 462 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 NCLNQ969V3 563 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 CCDC138Q96M89 665 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 RHNO1Q9BSD3 238 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 APOL5Q9BWW9 433 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 PRM3Q9NNZ6 103 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 CLEC4EQ9ULY5 219 aa15.93■□□□□ 0.14
NKX3-1-201ENST00000380871 SCN5AQ14524 2016 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 GABRR2P28476 465 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 CLCN7P51798 805 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 GP2P55259 537 aaKnown RBP15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 TRAF3Q13114 568 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 SKIV2LQ15477 1246 aaKnown RBP15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 SBSNQ6UWP8 590 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 FAM162AQ96A26 154 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 BARD1Q99728 777 aaKnown RBP15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 TTLL2Q9BWV7 592 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 ADGRE3Q9BY15 652 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 VPS51Q9UID3 782 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 BAG5Q9UL15 447 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 ERGIC3Q9Y282 383 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 NUP214P35658 2090 aaPredicted RBP15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 CYP4B1P13584 511 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 RAD23AP54725 363 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 CYP4F3Q08477 520 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 RGS21Q2M5E4 152 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 ALG1LQ6GMV1 187 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 NECAB2Q7Z6G3 386 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 HS6ST3Q8IZP7 471 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 LKAAEAR1Q8TD35 194 aa15.92■□□□□ 0.14
NKX3-1-201ENST00000380871 TRUB1Q8WWH5 349 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms