RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GPR137Q96N19 417 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 SERPINB11Q96P15 392 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 FTHL17Q9BXU8 183 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CDT1Q9H211 546 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 RSAD1Q9HA92 442 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 TXNRD2Q9NNW7 524 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 ERVK-18Q9QC07 812 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 RAPGEFL1Q9UHV5 662 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 LIPT1Q9Y234 373 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 MAGED1Q9Y5V3 778 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-201ENST00000379989 C17orf113A0A1B0GUU1 675 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 G3V2L1 256 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 WWP2O00308 870 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 MRASO14807 208 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 TBC1D4O60343 1298 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 LRIG2O94898 1065 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 DARSP14868 501 aaKnown RBP7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CD36P16671 472 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 TFEBP19484 476 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 RPS3P23396 243 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDKL5-201ENST00000379989 CHMP24386 653 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 ALDH3A2P51648 485 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 MAP2K5Q13163 448 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 HSDL1Q3SXM5 330 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 FUT11Q495W5 492 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 SPANXN2Q5MJ10 180 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 MORN1Q5T089 497 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 FAM45BPQ6NSW5 357 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 GPR142Q7Z601 462 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 PLD5Q8N7P1 536 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 C3orf58Q8NDZ4 430 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 FAM45AQ8TCE6 357 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF606Q8WXB4 792 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 USP7Q93009 1102 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 RNF34Q969K3 372 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 ELMO3Q96BJ8 720 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 WBP1Q96G27 269 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 SLC9A7Q96T83 725 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 FAM129BQ96TA1 746 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 KIFC3Q9BVG8 833 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 GATA5Q9BWX5 397 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-201ENST00000379989 C1QTNF6Q9BXI9 259 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 C8orf33Q9H7E9 229 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-201ENST00000379989 GSN-AS1Q9NRJ2 163 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 EXD2Q9NVH0 621 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 LRFN2Q9ULH4 789 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 RAP2CQ9Y3L5 183 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 PCDHGA2Q9Y5H1 932 aa7.34□□□□□ -1.23
CDKL5-201ENST00000379989 PNMA8CA0A1B0GUJ8 204 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TMEM191CA6NGB0 347 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CLDN24A6NM45 220 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 B4DXG7 233 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 H3BRB1 525 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PITPNM1O00562 1244 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 DFNA5O60443 496 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CELF2O95319 508 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PGLSO95336 258 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 F2P00734 622 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 LDLRP01130 860 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 IGHA2P01877 340 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 LTFP02788 710 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 SLC2A4P14672 509 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 HLA-DMAP28067 261 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 MTHFRP42898 656 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 GLUD2P49448 558 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 GDI2P50395 445 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PLIN5Q00G26 463 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 HYAL2Q12891 473 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 DAG1Q14118 895 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 AMHR2Q16671 573 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CYP51A1Q16850 503 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CLLU1Q5K131 121 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PRAMEF18Q5VWM3 479 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 SNX20Q7Z614 316 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 KRT73Q86Y46 540 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ZDHHC13Q8IUH4 622 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PSTKQ8IV42 348 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TIGD4Q8IY51 512 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CLRN3Q8NCR9 226 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TBC1D20Q96BZ9 403 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 SLC30A3Q99726 388 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 C11orf70Q9BRQ4 267 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 C16orf70Q9BSU1 422 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 AMBRA1Q9C0C7 1298 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 FAM118AQ9NWS6 357 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ZDHHC2Q9UIJ5 367 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 FZD1Q9UP38 647 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TRAPPC4Q9Y296 219 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 LYVE1Q9Y5Y7 322 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 KCNMB2Q9Y691 235 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PDCD11Q14690 1871 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TCRBV5S1A1TA0A578 114 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 FAM92AA1XBS5 289 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TISP43B9A030 160 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 NT5C1B-RDH14C9J2C7 533 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 HAS3O00219 553 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 DPYSL4O14531 572 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 HS6ST1O60243 411 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 MICAL2O94851 1124 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ARIH2O95376 493 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms