RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 LINC00271P0C7V0 271 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 PEX2P28328 305 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 SPAM1P38567 509 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 TUBA4AP68366 448 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 MRPS15P82914 257 aaKnown RBP10.6□□□□□ -0.71
NEDD9-201ENST00000379433 FOXK1P85037 733 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 LCP2Q13094 533 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 TIGD2Q4W5G0 525 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 CARD16Q5EG05 197 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 RARS2Q5T160 578 aaKnown RBP10.6□□□□□ -0.71
NEDD9-201ENST00000379433 CYHR1Q6ZMK1 362 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 KBTBD2Q8IY47 623 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 DLG3Q92796 817 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 COPS8Q99627 209 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 MAGEE1Q9HCI5 957 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 AURKCQ9UQB9 309 aa10.6□□□□□ -0.71
NEDD9-201ENST00000379433 TBC1D3BA6NDS4 549 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 SYCE1LA8MT33 242 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 H3BUI4 141 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 TNFRSF10AO00220 468 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 FFAR2O15552 330 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 SYNCRIPO60506 623 aaKnown RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 MAGEC1O60732 1142 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 EFCAB14O75071 495 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 XYLBO75191 536 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 MOSPD3O75425 235 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 TSPAN12O95859 305 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 OLFM2O95897 454 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 PENKP01210 267 aaPredicted RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 HMOX2P30519 316 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 SLC7A2P52569 658 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 NUBP1P53384 320 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 CCNIQ14094 377 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 LETMD1Q6P1Q0 360 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 ARHGAP11AQ6P4F7 1023 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 RBFAQ8N0V3 343 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 OR2A12Q8NGT7 310 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 GPR150Q8NGU9 434 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 CNDP2Q96KP4 475 aaKnown RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 DERL2Q9GZP9 239 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 TFB2MQ9H5Q4 396 aaKnown RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 SLAMF8Q9P0V8 285 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 ZNF225Q9UK10 706 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 LOC105371267A0A1B0GV96 52 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 ANGPT2O15123 496 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 FZD6O60353 706 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 CHEK2O96017 543 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 ESR1P03372 595 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 VHLP40337 213 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 PREPP48147 710 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 CLCN7P51798 805 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 CCNG1P51959 295 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 DNAJB13P59910 316 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 PSME3P61289 254 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 GPM6BQ13491 265 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 PPA1Q15181 289 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 FNDC3BQ53EP0 1204 aaKnown RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 C6orf10Q5SRN2 563 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 DOK6Q6PKX4 331 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 ANGPTL8Q6UXH0 198 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 GPRIN3Q6ZVF9 776 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 SNX20Q7Z614 316 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 NET1Q7Z628 596 aaPredicted RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 VRK3Q8IV63 474 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 RP9Q8TA86 221 aaKnown RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 DCUN1D1Q96GG9 259 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 MYOCQ99972 504 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 RTKNQ9BST9 563 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 RIOK2Q9BVS4 552 aaKnown RBP10.59□□□□□ -0.71
NEDD9-201ENST00000379433 SORCS3Q9UPU3 1222 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 COL6A3P12111 3177 aa10.59□□□□□ -0.71
NEDD9-201ENST00000379433 CROCCQ5TZA2 2017 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 TMEM202A6NGA9 273 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 STK25O00506 426 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 GAPDHSO14556 408 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-201ENST00000379433 GNAZP19086 355 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 EFNA1P20827 205 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-201ENST00000379433 DGKGP49619 791 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 RGS4P49798 205 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 ERVPABLB-1P60509 514 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 UFM1P61960 85 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 ACY1Q03154 408 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 REP15Q6BDI9 236 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 HSD11B1LQ7Z5J1 315 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 HMGCLL1Q8TB92 370 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 NXPE3Q969Y0 559 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 MED8Q96G25 268 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 APPL1Q9UKG1 709 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-201ENST00000379433 POP4O95707 220 aaKnown RBP10.58□□□□□ -0.72
NEDD9-201ENST00000379433 SNRPB2P08579 225 aaKnown RBP10.58□□□□□ -0.72
NEDD9-201ENST00000379433 SLC2A4P14672 509 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 ST8SIA6P61647 398 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 RELQ04864 619 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-201ENST00000379433 DHCR24Q15392 516 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 METTL21CQ5VZV1 264 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 C16orf89Q6UX73 402 aa10.58□□□□□ -0.72
NEDD9-201ENST00000379433 GDPD4Q6W3E5 623 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms