RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 USH1CQ9Y6N9 552 aa13.74□□□□□ -0.21
TPM2-204ENST00000378300 DGKBQ9Y6T7 804 aa13.74□□□□□ -0.21
TPM2-204ENST00000378300 SPAG17Q6Q759 2223 aa13.74□□□□□ -0.21
TPM2-204ENST00000378300 TLR4O00206 839 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 TAPBPO15533 448 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SNX2O60749 519 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SNNO75324 88 aaPredicted RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 DCTN3O75935 186 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 EML2O95834 649 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 CELA2BP08218 269 aaPredicted RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 VCLP18206 1134 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 DNAJB13P59910 316 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 RPA4Q13156 261 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SP140Q13342 867 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 CLCA4Q14CN2 919 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 PLK5Q496M5 336 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 WDR45BQ5MNZ6 344 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 PRAMEF14Q5SWL7 426 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 ZNF678Q5SXM1 525 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 DUS1LQ6P1R4 473 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 SLC30A9Q6PML9 568 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 PARGQ86W56 976 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SLC22A9Q8IVM8 553 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 NELL1Q92832 810 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 NSUN5Q96P11 429 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 NRTNQ99748 197 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 EGFL8Q99944 293 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 PITPNM3Q9BZ71 974 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SHCBP1LQ9BZQ2 653 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 RDH14Q9HBH5 336 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 ARL15Q9NXU5 204 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 NUDT4Q9NZJ9 180 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 LAMA1P25391 3075 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 CCDC189A1A4V9 331 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SLC16A5O15375 505 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 BCAT2O15382 392 aaPredicted RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 HNRNPCL1O60812 293 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 C1orf105O95561 183 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 CHRNGP07510 517 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 TSPAN8P19075 237 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 IMPDH1P20839 514 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 EEF1DP29692 281 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 GDF5P43026 501 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 SLC1A6P48664 564 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 ALDH18A1P54886 795 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 HERVK_113P63132 956 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 OCRLQ01968 901 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 PLOD1Q02809 727 aaPredicted RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 OVGP1Q12889 678 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 UNC50Q53HI1 259 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 LYSMD4Q5XG99 296 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 ATG16L1Q676U5 607 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 CAPRIN2Q6IMN6 1127 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 TRIM42Q8IWZ5 723 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 LSMEM2Q8N112 164 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 PDPRQ8NCN5 879 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 OR5AR1Q8NGP9 310 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 RHBDF1Q96CC6 855 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 CCDC126Q96EE4 140 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 INSM2Q96T92 566 aaPredicted RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 SORT1Q99523 831 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 TMEM79Q9BSE2 394 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 ERVK-6Q9BXR3 956 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 PTBP2Q9UKA9 531 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 ACSL5Q9ULC5 683 aa13.73□□□□□ -0.21
TPM2-204ENST00000378300 TDRD6O60522 2096 aaKnown RBP13.73□□□□□ -0.21
TPM2-204ENST00000378300 PRAMEF33A0A0G2JMD5 474 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 KLHL33A6NCF5 533 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 OR52A4PA6NMU1 304 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 PDZK1P1A8MUH7 402 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 PPP6CO00743 305 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 EDF1O60869 148 aaKnown RBP13.72□□□□□ -0.21
TPM2-204ENST00000378300 SUPT7LO94864 414 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 TNFP01375 233 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 ENO2P09104 434 aaPredicted RBP13.72□□□□□ -0.21
TPM2-204ENST00000378300 SLC35G4P0C7Q5 338 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 SP9P0CG40 484 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 CYP2A7P20853 494 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 IDSP22304 550 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 ACTR1BP42025 376 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 CDH13P55290 713 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 ACTR1AP61163 376 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 ABCE1P61221 599 aaKnown RBP13.72□□□□□ -0.21
TPM2-204ENST00000378300 C1orf61Q13536 156 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 ANGPT1Q15389 498 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 IQCHQ86VS3 1027 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 PHACTR4Q8IZ21 702 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 RAB3IL1Q8TBN0 382 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 FAM174AQ8TBP5 190 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 MCOLN3Q8TDD5 553 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 TFGQ92734 400 aaPredicted RBP13.72□□□□□ -0.21
TPM2-204ENST00000378300 L3HYPDHQ96EM0 354 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
TPM2-204ENST00000378300 FOPNLQ96NB1 174 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 GSTO2Q9H4Y5 243 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 TRNAU1APQ9NX07 287 aaKnown RBP13.72□□□□□ -0.21
TPM2-204ENST00000378300 DNAJC28Q9NX36 388 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms