RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SPHK1Q9NYA1 384 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 PAK5Q9P286 719 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 TDRKHQ9Y2W6 561 aaKnown RBP13.77□□□□□ -0.21
NELFE-201ENST00000375425 SPTBP11277 2137 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 E7EQ34 232 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 ZNF749O43361 778 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 CHRM5P08912 532 aaPredicted RBP13.76□□□□□ -0.21
NELFE-201ENST00000375425 UGT2B7P16662 529 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 CCR7P32248 378 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 RPL22P35268 128 aaKnown RBP13.76□□□□□ -0.21
NELFE-201ENST00000375425 CCL11P51671 97 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 CSE1LP55060 971 aaKnown RBP13.76□□□□□ -0.21
NELFE-201ENST00000375425 ITGA1P56199 1179 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 PRAMEP78395 509 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 FOXK1P85037 733 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 ACVR1Q04771 509 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 ZIC1Q15915 447 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 FASTKD1Q53R41 847 aaKnown RBP13.76□□□□□ -0.21
NELFE-201ENST00000375425 FAM69BQ5VUD6 431 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 TRIM73Q86UV7 250 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 SYTL1Q8IYJ3 562 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 CCDC89Q8N998 374 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 ING2Q9H160 280 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 FAM60AQ9NP50 221 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 OR6C2Q9NZP2 312 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 TCFL5Q9UL49 500 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 PLAGL1Q9UM63 463 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 SNX7Q9UNH6 387 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 TCAF1Q9Y4C2 921 aa13.76□□□□□ -0.21
NELFE-201ENST00000375425 FLNCQ14315 2725 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 ARGFXA6NJG6 315 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 IQCF5A8MTL0 148 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 F8W8V4 182 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 HCRTR1O43613 425 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 PDGFAP04085 211 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 CAPN1P07384 714 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 PPARGP37231 505 aaPredicted RBP13.75□□□□□ -0.21
NELFE-201ENST00000375425 HSPA14Q0VDF9 509 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 CHAF1BQ13112 559 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 SEMA3AQ14563 771 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 SIX1Q15475 284 aaPredicted RBP13.75□□□□□ -0.21
NELFE-201ENST00000375425 CCNG2Q16589 344 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 PTCHD3Q3KNS1 767 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 CPZQ66K79 652 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
NELFE-201ENST00000375425 GPR135Q8IZ08 494 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 C19orf47Q8N9M1 422 aaKnown RBP13.75□□□□□ -0.21
NELFE-201ENST00000375425 FLVCR1-AS1Q8TAF5 88 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 N4BP2L2Q92802 583 aaPredicted RBP13.75□□□□□ -0.21
NELFE-201ENST00000375425 TCTN2Q96GX1 697 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 ACSS2Q9NR19 701 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 HECTD1Q9ULT8 2610 aa13.75□□□□□ -0.21
NELFE-201ENST00000375425 DNAJC21Q5F1R6 531 aaKnown RBP13.74□□□□□ -0.21
NELFE-201ENST00000375425 PCID2Q5JVF3 399 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 FAM198BQ6UWH4 519 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 VRK3Q8IV63 474 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 PPHLN1Q8NEY8 458 aaKnown RBP13.74□□□□□ -0.21
NELFE-201ENST00000375425 ADAMTS17Q8TE56 1095 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 PEX13Q92968 403 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 DPH2Q9BQC3 489 aaPredicted RBP13.74□□□□□ -0.21
NELFE-201ENST00000375425 CARD6Q9BX69 1037 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 SPRTNQ9H040 489 aaPredicted RBP13.74□□□□□ -0.21
NELFE-201ENST00000375425 LZTFL1Q9NQ48 299 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 ANAPC5Q9UJX4 755 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 CDYLQ9Y232 598 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 DRG1Q9Y295 367 aaKnown RBP13.74□□□□□ -0.21
NELFE-201ENST00000375425 NBASA2RRP1 2371 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 PIKFYVEQ9Y2I7 2098 aa13.74□□□□□ -0.21
NELFE-201ENST00000375425 A0A0J9YY10 115 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 ISM1B1AKI9 464 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 H3BMH7 237 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 GPC4O75487 556 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 OR2B3O76000 313 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 HBQ1P09105 142 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 AGXTP21549 392 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 PTGIRP43119 386 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 GABRA4P48169 554 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 MLLT10P55197 1068 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 SESN2P58004 480 aaPredicted RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 CRADDP78560 199 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 KIR2DS3Q14952 304 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 DEFB110Q30KQ9 67 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 DRICH1Q6PGQ1 229 aaPredicted RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 SLC22A15Q8IZD6 547 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 ZBTB2Q8N680 514 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 CFAP61Q8NHU2 1237 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 LKAAEAR1Q8TD35 194 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 ASZ1Q8WWH4 475 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 SLC25A23Q9BV35 468 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 TSSK1BQ9BXA7 367 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 CHRNA10Q9GZZ6 450 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 MLXIPLQ9NP71 852 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 CATSPERZQ9NTU4 200 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 PLAAQ9Y263 795 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 AP1M2Q9Y6Q5 423 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 SEC16AO15027 2179 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 NBPF19A0A087WUL8 3843 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms