RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SNAPINO95295 136 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 F12P00748 615 aaPredicted RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 AGTP01019 485 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 RPS17P08708 135 aaKnown RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 VCLP18206 1134 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 PCMT1P22061 227 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 AKT2P31751 481 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MLF1P58340 268 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 GRM4Q14833 912 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 DPCR1Q3MIW9 517 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 CCDC58Q4VC31 144 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 TMEM92Q6UXU6 159 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MIGA2Q7L4E1 593 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 KCNK18Q7Z418 384 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 L3MBTL4Q8NA19 623 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SLC37A3Q8NCC5 494 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 IL31RAQ8NI17 732 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SLC2A14Q8TDB8 520 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 BRIX1Q8TDN6 353 aaKnown RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 ACER1Q8TDN7 264 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MARS2Q96GW9 593 aaKnown RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 ZNF285Q96NJ3 590 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 PAFAH2Q99487 392 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 RNF208Q9H0X6 261 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 GAL3ST2Q9H3Q3 398 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 ACTR8Q9H981 624 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 RXFP1Q9HBX9 757 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 STARD10Q9Y365 291 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 ASB4Q9Y574 426 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MYH11P35749 1972 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 GNG14A0A1W2PPG7 69 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 NR5A2O00482 541 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SLC37A4O43826 429 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 RPS6KA5O75582 802 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SERPINB7O75635 380 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 KRT8P05787 483 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SYN1P17600 705 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 GSTM2P28161 218 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SERPINB1P30740 379 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 FDFT1P37268 417 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 CSNK1EP49674 416 aaKnown RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 SNTB1Q13884 538 aaKnown RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 MFSD13AQ14CX5 517 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MOGAT2Q3SYC2 334 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 EPC2Q52LR7 807 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 OLIG1Q8TAK6 271 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 HAS1Q92839 578 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 MTERF3Q96E29 417 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 OSBPL1AQ9BXW6 950 aa8.84□□□□□ -0.99
UBR4-201ENST00000375218 SIRT3Q9NTG7 399 aaPredicted RBP8.84□□□□□ -0.99
UBR4-201ENST00000375218 A0A1B0GW15 77 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MEIS2O14770 477 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PSMD3O43242 534 aa8.83□□□□□ -1
UBR4-201ENST00000375218 DNPH1O43598 174 aa8.83□□□□□ -1
UBR4-201ENST00000375218 LANCL1O43813 399 aa8.83□□□□□ -1
UBR4-201ENST00000375218 CDH16O75309 829 aa8.83□□□□□ -1
UBR4-201ENST00000375218 SAP30O75446 220 aa8.83□□□□□ -1
UBR4-201ENST00000375218 CSDE1O75534 798 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 RAD17O75943 681 aa8.83□□□□□ -1
UBR4-201ENST00000375218 FCER2P06734 321 aa8.83□□□□□ -1
UBR4-201ENST00000375218 TCEA1P23193 301 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 PHBP35232 272 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MFAP4P55083 255 aa8.83□□□□□ -1
UBR4-201ENST00000375218 TOP3AQ13472 1001 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 EXOSC6Q5RKV6 272 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 KHDRBS2Q5VWX1 349 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 RESP18Q5W5W9 173 aa8.83□□□□□ -1
UBR4-201ENST00000375218 DCAF15Q66K64 600 aa8.83□□□□□ -1
UBR4-201ENST00000375218 GPR141Q7Z602 305 aa8.83□□□□□ -1
UBR4-201ENST00000375218 LINC00523Q86TU6 105 aa8.83□□□□□ -1
UBR4-201ENST00000375218 ZDHHC21Q8IVQ6 265 aa8.83□□□□□ -1
UBR4-201ENST00000375218 OR2L3Q8NG85 312 aa8.83□□□□□ -1
UBR4-201ENST00000375218 GLMPQ8WWB7 406 aa8.83□□□□□ -1
UBR4-201ENST00000375218 DUS3LQ96G46 650 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 ZNF578Q96N58 590 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 NECTIN4Q96NY8 510 aa8.83□□□□□ -1
UBR4-201ENST00000375218 NUP58Q9BVL2 599 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MKRN2Q9H000 416 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 RAB9BQ9NP90 201 aa8.83□□□□□ -1
UBR4-201ENST00000375218 WRAP73Q9P2S5 460 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 PLLPQ9Y342 182 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PCDHA13Q9Y5I0 950 aa8.83□□□□□ -1
UBR4-201ENST00000375218 AURKAO14965 403 aa8.83□□□□□ -1
UBR4-201ENST00000375218 NDUFA2O43678 99 aa8.83□□□□□ -1
UBR4-201ENST00000375218 OR4E1P0C645 316 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PSEN2P49810 448 aa8.83□□□□□ -1
UBR4-201ENST00000375218 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -12e-8■■□□□ 11.9
UBR4-201ENST00000375218 NAA20P61599 178 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MRPS25P82663 173 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 SCGB2A2Q13296 93 aa8.83□□□□□ -1
UBR4-201ENST00000375218 TRIP13Q15645 432 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 KLHL22Q53GT1 634 aa8.83□□□□□ -1
UBR4-201ENST00000375218 ZNF667Q5HYK9 610 aa8.83□□□□□ -1
UBR4-201ENST00000375218 GCNT6Q5T4J0 391 aa8.83□□□□□ -1
UBR4-201ENST00000375218 NT5DC1Q5TFE4 455 aa8.83□□□□□ -1
UBR4-201ENST00000375218 UBL4BQ8N7F7 174 aa8.83□□□□□ -1
UBR4-201ENST00000375218 C19orf18Q8NEA5 215 aa8.83□□□□□ -1
UBR4-201ENST00000375218 KLRG1Q96E93 195 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PKP2Q99959 881 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MRIQ9BWK5 157 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms