RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ACVRL1P37023 503 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 OR1G1P47890 313 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 NPTX1Q15818 432 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 PHKG1Q16816 387 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 C18orf21Q32NC0 220 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 FAM174BQ3ZCQ3 159 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 SPATA2LQ8IUW3 424 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 PHACTR4Q8IZ21 702 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 NKAPQ8N5F7 415 aaKnown RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 AADATQ8N5Z0 425 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF548Q8NEK5 533 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-203ENST00000374877 OR8J3Q8NGG0 315 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 OR5K1Q8NHB7 308 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 RMDN1Q96DB5 314 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 NSMCE3Q96MG7 304 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ZBTB18Q99592 522 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 GORASP2Q9H8Y8 452 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 HEBP1Q9NRV9 189 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 USE1Q9NZ43 259 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 PMF1-BGLAPU3KQ54 211 aa10.88□□□□□ -0.67
CCDC40-203ENST00000374877 ARNTLO00327 626 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TSPAN3O60637 253 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 VPS26AO75436 327 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 OR4Q2P0C623 313 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 GSSP48637 474 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 PIK3CGP48736 1102 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 ELAVL2Q12926 359 aaKnown RBP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 MAPKAPK3Q16644 382 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 HIST2H2ACQ16777 129 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TYSND1Q2T9J0 566 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 MS4A13Q5J8X5 152 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 C6orf183Q5T699 404 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 PRR23BQ6ZRT6 265 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 DCP2Q8IU60 420 aaKnown RBP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 PLD3Q8IV08 490 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 LTBP2Q14767 1821 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 WASH4PA8MWX3 477 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 OR1I1O60431 355 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 OAZ2O95190 189 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 CCDC159P0C7I6 412 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 MSH3P20585 1137 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 AKT1P31749 480 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 RCVRNP35243 200 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TGFBR1P36897 503 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TBX4P57082 545 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 SELENBP1Q13228 472 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 GTDC1Q4AE62 458 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 CATSPEREQ5SY80 951 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 DEPDC1Q5TB30 811 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 OVOS1Q6IE37 1185 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 MIB1Q86YT6 1006 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 RPL3LQ92901 407 aaKnown RBP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 IGSF8Q969P0 613 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 RPRD1AQ96P16 312 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 SMIM14Q96QK8 99 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF382Q96SR6 550 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 PKMYT1Q99640 499 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 RHNO1Q9BSD3 238 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 SIAEQ9HAT2 523 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 ZFP14Q9HCL3 533 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 NECTIN3Q9NQS3 549 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 ANKMY1Q9P2S6 941 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 FBXO10Q9UK96 956 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 NAALAD2Q9Y3Q0 740 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TBKBP1A7MCY6 615 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 IGFBP5P24593 272 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 ST13P50502 369 aaKnown RBP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 IL2P60568 153 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TSPY1Q01534 308 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 EFEMP1Q12805 493 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TEX26Q8N6G2 289 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 CCDC115Q96NT0 180 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 SLX1AQ9BQ83 275 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 TMEM248Q9NWD8 314 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 NEUROG3Q9Y4Z2 214 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 ACTL7AQ9Y615 435 aa10.87□□□□□ -0.67
CCDC40-203ENST00000374877 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 E5RI56 91 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 LSM1O15116 133 aaKnown RBP10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SERPINA1P01009 418 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 ITGB1P05556 798 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SERPINF2P08697 491 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SEPHS1P49903 392 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 GTF2H3Q13889 308 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 ABRAXAS2Q15018 415 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 ACOX1Q15067 660 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 PON2Q15165 354 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 GLT6D1Q7Z4J2 308 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 B3GNT8Q7Z7M8 397 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF540Q8NDQ6 660 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 OR4F6Q8NGB9 312 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 C1QTNF3Q9BXJ4 246 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 RMND5AQ9H871 391 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 IL23AQ9NPF7 189 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 PRDM5Q9NQX1 630 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-203ENST00000374877 FBXO8Q9NRD0 319 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms