RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 FRS2Q8WU20 508 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 SELENOMQ8WWX9 145 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 BIRC7Q96CA5 298 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 AURKBQ96GD4 344 aaPredicted RBP15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 RNF145Q96MT1 663 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 TSSK3Q96PN8 268 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 CENPKQ9BS16 269 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC32A1Q9H598 525 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 SOX17Q9H6I2 414 aaPredicted RBP15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PARVBQ9HBI1 364 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PRM3Q9NNZ6 103 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 AGPAT4Q9NRZ5 378 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC6A13Q9NSD5 602 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 COQ6Q9Y2Z9 468 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 NEUROG3Q9Y4Z2 214 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 RNF103-CHMP3A0A140T963 221 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 KANSL1LA0AUZ9 987 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 ANTXRLA6NF34 631 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 PLK4O00444 970 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 GSNP06396 782 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 HIST1H2AGP0C0S8 130 aaPredicted RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 EBLN1P0CF75 366 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 TIMP2P16035 220 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 HIST1H2ADP20671 130 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 TACR1P25103 407 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 FASP25445 335 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 VIPR2P41587 438 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 POLR2LP62875 67 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 CAMK1Q14012 370 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 CNPY1Q3B7I2 92 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 GLYATQ6IB77 296 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 GPR65Q8IYL9 337 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 PHACTR4Q8IZ21 702 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 DTWD1Q8N5C7 304 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 METTL25Q8N6Q8 603 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 LMNTD1Q8N9Z9 388 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC13A3Q8WWT9 602 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 ASB11Q8WXH4 323 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 HIST1H2AHQ96KK5 128 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 HIST1H2AJQ99878 128 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 H2AFJQ9BTM1 129 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 THUMPD3Q9BV44 507 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 NTMT1Q9BV86 223 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 CEP44Q9C0F1 390 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 RDH14Q9HBH5 336 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 DUS2Q9NX74 493 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 MYO9BQ13459 2157 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 IGLV3-16A0A075B6K0 115 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 CLPTM1O96005 669 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 ENO2P09104 434 aaPredicted RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 PIM1P11309 404 aaPredicted RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 BMP2P12643 396 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 HLA-EP13747 358 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 XPAP23025 273 aaPredicted RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 NFKBIAP25963 317 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 MRPL19P49406 292 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 CTSCP53634 463 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 KIAA0040Q15053 153 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 SF1Q15637 639 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 CCSMST1Q4G0I0 132 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 TRIM74Q86UV6 250 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 ANKFN1Q8N957 763 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 OR10A6Q8NH74 314 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 UBTD2Q8WUN7 234 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 TRAPPC9Q96Q05 1148 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC2A11Q9BYW1 496 aa15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 MTCL1Q9Y4B5 1905 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-202ENST00000374253 HNRNPRO43390 633 aaKnown RBP15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 SGTAO43765 313 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 SEC24DO94855 1032 aaPredicted RBP15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 TFAP2AP05549 437 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 BCKDHAP12694 445 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 SYN1P17600 705 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 MSH3P20585 1137 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 JAK1P23458 1154 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 HSPA13P48723 471 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 SFTPA1Q8IWL2 248 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 FAM86B1Q8N7N1 296 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 FIG4Q92562 907 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 VPS50Q96JG6 964 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 EGLN2Q96KS0 407 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC12A9Q9BXP2 914 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 ELOVL6Q9H5J4 265 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 CAAP1Q9H8G2 361 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 TRPS1Q9UHF7 1281 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 ANAPC2Q9UJX6 822 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 CNOT11Q9UKZ1 510 aaKnown RBP15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC28A1O00337 649 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 KPNA3O00505 521 aaPredicted RBP15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 AREL1O15033 823 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 TSPAN6O43657 245 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 VIPR1P32241 457 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 HALP42357 657 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 EPHA5P54756 1037 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 EEFSECP57772 596 aaKnown RBP15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 DDX39BQ13838 428 aaKnown RBP15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 MAPKAPK3Q16644 382 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 CACHD1Q5VU97 1274 aa15.59■□□□□ 0.09
CNKSR1-202ENST00000374253 DPP10Q8N608 796 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms