RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ZNF641Q96N77 438 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ADGRE3Q9BY15 652 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 MRPL1Q9BYD6 325 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 BTBD1Q9H0C5 482 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ZSCAN32Q9NX65 697 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TUBA8Q9NY65 449 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 WSB2Q9NYS7 404 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 VPS9D1Q9Y2B5 631 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 MED16Q9Y2X0 877 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 FADS3Q9Y5Q0 445 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 CEP192Q8TEP8 1941 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3DA0A087WVF3 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3IA0A087WXS9 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3EA0A087X179 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3KA0A087X1G2 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 HTR3EA5X5Y0 456 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3FA6NER0 549 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 CCDC160A6NGH7 325 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3LB9A6J9 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 H7C0S8 307 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PFDN6O15212 129 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 HTRA2O43464 458 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF217O75362 1048 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 SORBS2O94875 1100 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PGLSO95336 258 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3HP0C7X1 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 CD1EP15812 388 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 LPOP22079 712 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 CD6P30203 668 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ERFP50548 548 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PPP2CBP62714 309 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PPP2CAP67775 309 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 RPL6Q02878 288 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 RELAQ04206 551 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ARMC12Q5T9G4 340 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3GQ6DHY5 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3CQ6IPX1 549 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PRR23BQ6ZRT6 265 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TBC1D3Q8IZP1 549 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PIH1D2Q8WWB5 315 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 LPGAT1Q92604 370 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 NELL1Q92832 810 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 ECHDC3Q96DC8 303 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 MARK4Q96L34 752 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 WRAP53Q9BUR4 548 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 CCDC68Q9H2F9 335 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PCDH12Q9NPG4 1184 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 PFDN4Q9NQP4 134 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 UTP6Q9NYH9 597 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 TAS2R13Q9NYV9 303 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 CNOT11Q9UKZ1 510 aaKnown RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 FAF1Q9UNN5 650 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-203ENST00000374116 FIS1Q9Y3D6 152 aa13.99□□□□□ -0.17
HMGA1-203ENST00000374116 MUC6Q6W4X9 2439 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 H0YJX3 145 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 BOLA2-SMG1P6H3BVE0 249 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 UBFD1O14562 309 aaKnown RBP13.98□□□□□ -0.17
HMGA1-203ENST00000374116 UBDO15205 165 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 GPC4O75487 556 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 NDUFS3O75489 264 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 RHOBTB1O94844 696 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 PCDH8O95206 1070 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 PRSS56P0CW18 603 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 XPAP23025 273 aaPredicted RBP13.98□□□□□ -0.17
HMGA1-203ENST00000374116 MAOBP27338 520 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 MAPK8P45983 427 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 ATP6V0D1P61421 351 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 STX5Q13190 355 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 LRRC36Q1X8D7 754 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 GRAMD1BQ3KR37 738 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 SETMARQ53H47 684 aaPredicted RBP13.98□□□□□ -0.17
HMGA1-203ENST00000374116 PIGGQ5H8A4 983 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 ZBTB44Q8NCP5 570 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 CDRT15Q96T59 188 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 HDAC8Q9BY41 377 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 DERL2Q9GZP9 239 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 WDR41Q9HAD4 459 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 TNFRSF12AQ9NP84 129 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 SCML1Q9UN30 329 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 TMEM98Q9Y2Y6 226 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 COQ6Q9Y2Z9 468 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 AP4B1Q9Y6B7 739 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 SLCO1B1Q9Y6L6 691 aa13.98□□□□□ -0.17
HMGA1-203ENST00000374116 CAPN8A6NHC0 703 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 PLRG1O43660 514 aaKnown RBP13.97□□□□□ -0.17
HMGA1-203ENST00000374116 NDUFS2O75306 463 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 SRP72O76094 671 aaKnown RBP13.97□□□□□ -0.17
HMGA1-203ENST00000374116 SEMA4FO95754 770 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 C8BP07358 591 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 FGF4P08620 206 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF12P17014 697 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 PTGER3P43115 390 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 ATP4BP51164 291 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 TUBA4AP68366 448 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 OR4D1Q15615 310 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF423Q2M1K9 1284 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 ZNF528Q3MIS6 628 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 ZFP1Q6P2D0 407 aa13.97□□□□□ -0.17
HMGA1-203ENST00000374116 BRAT1Q6PJG6 821 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms