RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ACTN3Q08043 901 aaPredicted RBP25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 UBAP2LQ14157 1087 aaKnown RBP25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 UNC5DQ6UXZ4 953 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 MILR1Q7Z6M3 343 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 MAGEC3Q8TD91 643 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 TIMM29Q9BSF4 260 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 NTMT1Q9BV86 223 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 MRGBPQ9NV56 204 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 ARL8BQ9NVJ2 186 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 ACSL5Q9ULC5 683 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 CYP8B1Q9UNU6 501 aa25.64■■□□□ 1.7
ATPAF1-202ENST00000371937 POM121BA6NF01 834 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 ZNF217O75362 1048 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 CALB2P22676 271 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 KELP23276 732 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 NCALDP61601 193 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 DMPKQ09013 629 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 PTCHD3Q3KNS1 767 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 PDZD3Q86UT5 571 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 GALNT13Q8IUC8 556 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 DDIASQ8IXT1 998 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 OR4F6Q8NGB9 312 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 PRR5-ARHGAP8B1AHC4 643 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 C10orf142B7Z368 130 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 PIP5K1BO14986 540 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 VPS4BO75351 444 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 WDR47O94967 919 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 BDKRB1P46663 353 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 CCR5P51681 352 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 TRAF3Q13114 568 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 LETMD1Q6P1Q0 360 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 CHST15Q7LFX5 561 aaPredicted RBP25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 CDYL2Q8N8U2 506 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 METTL6Q8TCB7 284 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 TOE1Q96GM8 510 aaKnown RBP25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 SCARF2Q96GP6 870 aaPredicted RBP25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 CDK15Q96Q40 435 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 HHIPQ96QV1 700 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 TM7SF3Q9NS93 570 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 C2orf42Q9NWW7 574 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 TIMM22Q9Y584 194 aa25.63■■□□□ 1.69
ATPAF1-202ENST00000371937 DCXO43602 365 aa25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 FUCA1P04066 466 aa25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 EBLN1P0CF75 366 aa25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 ESRRAP11474 423 aaPredicted RBP25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 CLDN2P57739 230 aa25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 ZXDCQ2QGD7 858 aaPredicted RBP25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 TREML1Q86YW5 311 aa25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 PTCD3Q96EY7 689 aaKnown RBP25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 UHRF1Q96T88 793 aaPredicted RBP25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 STOX2Q9P2F5 926 aaPredicted RBP25.62■■□□□ 1.69
ATPAF1-202ENST00000371937 HGFP14210 728 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 HTR1BP28222 390 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 ADSLP30566 484 aaPredicted RBP25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 PYCR3Q53H96 274 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 KIAA0895LQ68EN5 471 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 AGTRAPQ6RW13 159 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 PKP4Q99569 1192 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 ZDHHC5Q9C0B5 715 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 DNAJC11Q9NVH1 559 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 LNPEPQ9UIQ6 1025 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 MOSPD1Q9UJG1 213 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 SUFUQ9UMX1 484 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 HS3ST3A1Q9Y663 406 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 CAPN7Q9Y6W3 813 aa25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 ZFC3H1O60293 1989 aaKnown RBP25.61■■□□□ 1.69
ATPAF1-202ENST00000371937 IFRD1O00458 451 aaPredicted RBP25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 TOR1BO14657 336 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 SLC22A2O15244 555 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 DNAJC8O75937 253 aaPredicted RBP25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 FSBPO95073 299 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 RPN2P04844 631 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 CAPN1P07384 714 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 CD6P30203 668 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 YPEL5P62699 121 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 NFATC4Q14934 902 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 LARP4Q71RC2 724 aaKnown RBP eCLIP25.6■■□□□ 1.693e-7■□□□□ 10.9
ATPAF1-202ENST00000371937 CPSF7Q8N684 471 aaKnown RBP25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 DCBLD1Q8N8Z6 715 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 SNX31Q8N9S9 440 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 KLHL29Q96CT2 875 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 BMFQ96LC9 184 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 ATG10Q9H0Y0 220 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 TUBB1Q9H4B7 451 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 C6orf106Q9H6K1 298 aaPredicted RBP25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 TBC1D17Q9HA65 648 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 WSB2Q9NYS7 404 aaPredicted RBP25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 THEGQ9P2T0 379 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 TRPS1Q9UHF7 1281 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 TAGLN3Q9UI15 199 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 ST14Q9Y5Y6 855 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 MYO1CO00159 1063 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 APBB3O95704 486 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 SLC16A8O95907 504 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 ACP5P13686 325 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 NUDT1P36639 197 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 PFN3P60673 137 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 CCSMST1Q4G0I0 132 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 CHSY3Q70JA7 882 aa25.6■■□□□ 1.69
ATPAF1-202ENST00000371937 KLHDC8AQ8IYD2 350 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms